Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAV8-1A0A0A6YYK1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AF213884.3-201ENST00000563833 479 ntBASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC093484.2-201ENST00000580996 2166 ntBASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 RASA4CP-201ENST00000424092 1398 ntBASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-1A0A0A6YYK1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC120498.10-201ENST00000621827 505 ntBASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV8-1A0A0A6YYK1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 TMEM179-206ENST00000616017 1645 ntBASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 EDA-201ENST00000338901 1233 ntBASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC138907.5-202ENST00000569484 235 ntBASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 AC106739.1-201ENST00000617035 715 ntBASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-1A0A0A6YYK1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV8-1A0A0A6YYK1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.21■□□□□ 0.02
TRAV8-1A0A0A6YYK1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV8-1A0A0A6YYK1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-1A0A0A6YYK1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms