Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC020763.4-201ENST00000623414 4170 ntBASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC138907.5-202ENST00000569484 235 ntBASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 KRT18P20-201ENST00000548986 1279 ntBASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AP004607.4-201ENST00000530158 1459 ntBASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC004854.2-201ENST00000608450 1441 ntBASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 KRT18P11-201ENST00000435214 1283 ntBASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC104187.1-201ENST00000607510 612 ntBASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SMG8-203ENST00000578922 2178 ntBASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC099778.1-201ENST00000568593 1911 ntBASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AC010141.2-201ENST00000452426 721 ntBASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AL162430.1-201ENST00000480705 870 ntBASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 AP001160.3-201ENST00000601484 763 ntBASIC14.17□□□□□ -0.14
TRAV8-3A0A0A6YYJ7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms