Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
SLC1A1P43005 RN7SKP76-201ENST00000364419 323 ntBASIC7.81□□□□□ -1.16
SLC1A1P43005 AC092952.1-201ENST00000397646 1209 ntBASIC7.81□□□□□ -1.16
SLC1A1P43005 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC7.81□□□□□ -1.16
SLC1A1P43005 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC7.81□□□□□ -1.16
SLC1A1P43005 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.81□□□□□ -1.16
SLC1A1P43005 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC7.81□□□□□ -1.16
SLC1A1P43005 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC7.81□□□□□ -1.16
SLC1A1P43005 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SLC1A1P43005 GGTA1P-204ENST00000488429 1104 ntBASIC7.81□□□□□ -1.16
SLC1A1P43005 AC114300.1-201ENST00000502347 280 ntBASIC7.81□□□□□ -1.16
SLC1A1P43005 AC055733.3-201ENST00000505214 523 ntBASIC7.81□□□□□ -1.16
SLC1A1P43005 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC7.81□□□□□ -1.16
SLC1A1P43005 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.81□□□□□ -1.16
SLC1A1P43005 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC7.81□□□□□ -1.16
SLC1A1P43005 AP000619.1-201ENST00000540293 1000 ntBASIC7.81□□□□□ -1.16
SLC1A1P43005 NUTF2P2-201ENST00000551207 384 ntBASIC7.81□□□□□ -1.16
SLC1A1P43005 SRMP2-201ENST00000553832 916 ntBASIC7.81□□□□□ -1.16
SLC1A1P43005 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.81□□□□□ -1.16
SLC1A1P43005 RPL35AP25-201ENST00000584631 330 ntBASIC7.81□□□□□ -1.16
SLC1A1P43005 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.81□□□□□ -1.16
SLC1A1P43005 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC7.81□□□□□ -1.16
SLC1A1P43005 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SLC1A1P43005 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.81□□□□□ -1.16
SLC1A1P43005 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SLC1A1P43005 AC087045.3-201ENST00000623046 2468 ntBASIC7.81□□□□□ -1.16
SLC1A1P43005 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SLC1A1P43005 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
SLC1A1P43005 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SLC1A1P43005 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.81□□□□□ -1.16
SLC1A1P43005 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SLC1A1P43005 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.81□□□□□ -1.16
SLC1A1P43005 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SLC1A1P43005 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SLC1A1P43005 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SLC1A1P43005 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC7.81□□□□□ -1.16
SLC1A1P43005 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AC005614.1-201ENST00000598952 3653 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AL353898.3-201ENST00000624679 1755 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.8□□□□□ -1.16
SLC1A1P43005 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 BX322650.1-201ENST00000332359 2143 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 SSX6-201ENST00000376932 562 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
SLC1A1P43005 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AC244505.2-201ENST00000435089 759 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 RPS10P3-201ENST00000439253 494 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 AP006193.1-201ENST00000440724 485 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AC008026.1-201ENST00000460492 447 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 AC026254.1-201ENST00000479473 431 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 RNA5SP422-201ENST00000516778 111 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 IGKV2-29-201ENST00000521304 372 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AC009630.2-201ENST00000524133 570 ntTSL 5 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AP003385.2-201ENST00000524910 973 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AP003122.2-201ENST00000527332 486 ntTSL 3 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC7.8□□□□□ -1.16
SLC1A1P43005 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.8□□□□□ -1.16
SLC1A1P43005 AL137190.1-201ENST00000603288 282 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 AL590560.2-201ENST00000608430 732 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.8□□□□□ -1.16
SLC1A1P43005 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
SLC1A1P43005 SF3A3P1-201ENST00000446317 1477 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 AC090643.1-201ENST00000623600 3100 ntBASIC7.8□□□□□ -1.16
SLC1A1P43005 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.8□□□□□ -1.16
SLC1A1P43005 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
SLC1A1P43005 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
SLC1A1P43005 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
SLC1A1P43005 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.79□□□□□ -1.16
SLC1A1P43005 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SLC1A1P43005 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.79□□□□□ -1.16
SLC1A1P43005 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SLC1A1P43005 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms