RNA–Protein interactions for RNA: ENST00000627300.2

LINC01440-208, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-208ENST00000627300 AEBP2Q6ZN18 517 aaPredicted RBP23.07■■□□□ 1.28
LINC01440-208ENST00000627300 CHIC1Q5VXU3 224 aa21.78■■□□□ 1.08
LINC01440-208ENST00000627300 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
LINC01440-208ENST00000627300 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
LINC01440-208ENST00000627300 FOXD1Q16676 465 aa18.53■□□□□ 0.56
LINC01440-208ENST00000627300 POTEDQ86YR6 584 aa18.06■□□□□ 0.48
LINC01440-208ENST00000627300 MSH5O43196 834 aa17.76■□□□□ 0.43
LINC01440-208ENST00000627300 PIAS4Q8N2W9 510 aaPredicted RBP17.21■□□□□ 0.35
LINC01440-208ENST00000627300 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
LINC01440-208ENST00000627300 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
LINC01440-208ENST00000627300 NISCHQ9Y2I1 1504 aa16.92■□□□□ 0.3
LINC01440-208ENST00000627300 ABCC9O60706 1549 aa16.91■□□□□ 0.3
LINC01440-208ENST00000627300 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
LINC01440-208ENST00000627300 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
LINC01440-208ENST00000627300 ADRA2BP18089 450 aa16.72■□□□□ 0.27
LINC01440-208ENST00000627300 DMRT2Q9Y5R5 561 aa15.73■□□□□ 0.11
LINC01440-208ENST00000627300 CCDC180Q9P1Z9 1646 aa15.63■□□□□ 0.09
LINC01440-208ENST00000627300 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
LINC01440-208ENST00000627300 PABPN1Q86U42 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC01440-208ENST00000627300 RB1CC1Q8TDY2 1594 aa15.53■□□□□ 0.08
LINC01440-208ENST00000627300 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
LINC01440-208ENST00000627300 CECR2Q9BXF3 1484 aa15.42■□□□□ 0.06
LINC01440-208ENST00000627300 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
LINC01440-208ENST00000627300 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
LINC01440-208ENST00000627300 BICRAQ9NZM4 1560 aa15.21■□□□□ 0.03
LINC01440-208ENST00000627300 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.02
LINC01440-208ENST00000627300 CUX2O14529 1486 aa15.18■□□□□ 0.02
LINC01440-208ENST00000627300 NACADO15069 1562 aa15.17■□□□□ 0.02
LINC01440-208ENST00000627300 UNC13AQ9UPW8 1703 aa15.04■□□□□ -0
LINC01440-208ENST00000627300 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
LINC01440-208ENST00000627300 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
LINC01440-208ENST00000627300 DCAF8L1A6NGE4 600 aa14.92□□□□□ -0.02
LINC01440-208ENST00000627300 SHROOM4Q9ULL8 1493 aa14.92□□□□□ -0.02
LINC01440-208ENST00000627300 EIF4G1Q04637 1599 aaKnown RBP14.9□□□□□ -0.02
LINC01440-208ENST00000627300 C1QBPQ07021 282 aaKnown RBP14.85□□□□□ -0.03
LINC01440-208ENST00000627300 PPP4R3CPQ6ZMV5 832 aa14.74□□□□□ -0.05
LINC01440-208ENST00000627300 RNF216Q9NWF9 866 aaPredicted RBP14.73□□□□□ -0.05
LINC01440-208ENST00000627300 CNKSR2Q8WXI2 1034 aa14.7□□□□□ -0.06
LINC01440-208ENST00000627300 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
LINC01440-208ENST00000627300 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
LINC01440-208ENST00000627300 ERCC6Q03468 1493 aa14.64□□□□□ -0.07
LINC01440-208ENST00000627300 ILDR1Q86SU0 546 aaPredicted RBP14.46□□□□□ -0.09
LINC01440-208ENST00000627300 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
LINC01440-208ENST00000627300 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
LINC01440-208ENST00000627300 SCRIBQ14160 1630 aa14.23□□□□□ -0.13
LINC01440-208ENST00000627300 NESP48681 1621 aa14.19□□□□□ -0.14
LINC01440-208ENST00000627300 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
LINC01440-208ENST00000627300 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
LINC01440-208ENST00000627300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.14
LINC01440-208ENST00000627300 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
LINC01440-208ENST00000627300 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
LINC01440-208ENST00000627300 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
LINC01440-208ENST00000627300 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
LINC01440-208ENST00000627300 BAZ1AQ9NRL2 1556 aaPredicted RBP14.09□□□□□ -0.15
LINC01440-208ENST00000627300 POTEHQ6S545 545 aa14.08□□□□□ -0.16
LINC01440-208ENST00000627300 ARHGEF11O15085 1522 aa14.01□□□□□ -0.17
LINC01440-208ENST00000627300 CYB5RLQ6IPT4 315 aa13.99□□□□□ -0.17
LINC01440-208ENST00000627300 SMARCA2P51531 1590 aa13.96□□□□□ -0.17
LINC01440-208ENST00000627300 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
LINC01440-208ENST00000627300 NPM3O75607 178 aaKnown RBP13.95□□□□□ -0.18
LINC01440-208ENST00000627300 PDS5BQ9NTI5 1447 aa13.89□□□□□ -0.19
LINC01440-208ENST00000627300 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
LINC01440-208ENST00000627300 WDR62O43379 1518 aa13.85□□□□□ -0.19
LINC01440-208ENST00000627300 ATAD2BQ9ULI0 1458 aa13.84□□□□□ -0.19
LINC01440-208ENST00000627300 DSG3P32926 999 aa13.83□□□□□ -0.2
LINC01440-208ENST00000627300 KIF21AQ7Z4S6 1674 aa13.82□□□□□ -0.2
LINC01440-208ENST00000627300 MRC2Q9UBG0 1479 aa13.81□□□□□ -0.2
LINC01440-208ENST00000627300 ARAP1Q96P48 1450 aa13.8□□□□□ -0.2
LINC01440-208ENST00000627300 HMGXB3Q12766 1538 aa13.8□□□□□ -0.2
LINC01440-208ENST00000627300 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
LINC01440-208ENST00000627300 KCNA4P22459 653 aa13.75□□□□□ -0.21
LINC01440-208ENST00000627300 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
LINC01440-208ENST00000627300 CAPN15O75808 1086 aa13.73□□□□□ -0.21
LINC01440-208ENST00000627300 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
LINC01440-208ENST00000627300 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
LINC01440-208ENST00000627300 APLP2Q06481 763 aa13.63□□□□□ -0.23
LINC01440-208ENST00000627300 SOCS7O14512 581 aa13.61□□□□□ -0.23
LINC01440-208ENST00000627300 FBXO41Q8TF61 875 aa13.6□□□□□ -0.23
LINC01440-208ENST00000627300 CADPSQ9ULU8 1353 aa13.59□□□□□ -0.23
LINC01440-208ENST00000627300 RSF1Q96T23 1441 aaPredicted RBP13.58□□□□□ -0.24
LINC01440-208ENST00000627300 LMTK3Q96Q04 1460 aa13.56□□□□□ -0.24
LINC01440-208ENST00000627300 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
LINC01440-208ENST00000627300 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
LINC01440-208ENST00000627300 ILDR2Q71H61 639 aa13.46□□□□□ -0.25
LINC01440-208ENST00000627300 CEP164Q9UPV0 1460 aa13.46□□□□□ -0.25
LINC01440-208ENST00000627300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
LINC01440-208ENST00000627300 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
LINC01440-208ENST00000627300 ERCC6L2Q5T890 1561 aa13.44□□□□□ -0.26
LINC01440-208ENST00000627300 SMARCA4P51532 1647 aa13.41□□□□□ -0.26
LINC01440-208ENST00000627300 ZNF608Q9ULD9 1512 aaPredicted RBP13.4□□□□□ -0.26
LINC01440-208ENST00000627300 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
LINC01440-208ENST00000627300 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
LINC01440-208ENST00000627300 FANCD2Q9BXW9 1451 aa13.37□□□□□ -0.27
LINC01440-208ENST00000627300 URB2Q14146 1524 aaKnown RBP13.36□□□□□ -0.27
LINC01440-208ENST00000627300 HECW2Q9P2P5 1572 aa13.3□□□□□ -0.28
LINC01440-208ENST00000627300 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
LINC01440-208ENST00000627300 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
LINC01440-208ENST00000627300 SAMD1Q6SPF0 538 aaPredicted RBP13.27□□□□□ -0.29
LINC01440-208ENST00000627300 ABCB7O75027 752 aa13.26□□□□□ -0.29
LINC01440-208ENST00000627300 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms