Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 MIR498-201ENST00000385134 124 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AL022100.1-202ENST00000421214 548 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 PPIL1P1-201ENST00000423936 499 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 ANKRD54P1-201ENST00000433115 471 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 DNAJA1P6-201ENST00000437347 354 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AC092570.2-201ENST00000452117 1143 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AC015820.1-201ENST00000473882 321 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AC008799.2-201ENST00000484429 647 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AP001994.1-201ENST00000527539 826 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 EXOSC3P2-201ENST00000594464 497 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AL589765.5-201ENST00000596133 515 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AL035417.2-201ENST00000603887 796 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AL139123.1-201ENST00000612008 430 ntBASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 METAP1-212ENST00000625963 147 ntTSL 5 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
HMG20BQ9P0W2 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
HMG20BQ9P0W2 AL157713.1-201ENST00000379752 1531 ntBASIC9.15□□□□□ -0.95
HMG20BQ9P0W2 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
HMG20BQ9P0W2 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 IPO7P2-201ENST00000451446 1750 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 MAPK10-333ENST00000641607 2481 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 RNA5SP396-201ENST00000364834 120 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 GRPEL2P2-201ENST00000421856 670 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AC105052.2-201ENST00000434317 794 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AL390026.1-201ENST00000456647 457 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 ATP5J2P4-201ENST00000538774 267 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AC068631.3-201ENST00000538831 225 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 UBE2CP4-201ENST00000561405 535 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 HNRNPA1P67-201ENST00000604027 926 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 CUX2P1-201ENST00000606426 298 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AC133552.3-201ENST00000572236 1869 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 SAMMSON-203ENST00000641005 2168 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 AC006058.1-201ENST00000568686 5067 ntBASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 RERE-203ENST00000400907 2973 ntTSL 5 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
HMG20BQ9P0W2 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 EEF1A1P5-201ENST00000436459 1389 ntBASIC9.13□□□□□ -0.95
HMG20BQ9P0W2 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms