Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RN7SKP131-201ENST00000410698 301 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 AL353803.3-201ENST00000444641 335 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 PTMAP1-205ENST00000455552 325 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 RPL5P15-201ENST00000475870 897 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 STX8-209ENST00000574431 731 ntTSL 3 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 AC005518.2-201ENST00000603254 282 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 SNX29P2-204ENST00000603801 875 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 AL022238.3-201ENST00000609279 443 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 AC073488.8-201ENST00000631952 757 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 TRIM60P14-201ENST00000513444 1419 ntBASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
HMG20BQ9P0W2 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 IST1-208ENST00000535424 4082 ntTSL 5 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 RN7SKP211-201ENST00000363328 315 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 LST1-211ENST00000376110 433 ntTSL 3 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 SNORA2C-201ENST00000408564 137 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 EEF1A1P27-201ENST00000429983 1135 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AC095059.2-201ENST00000510601 933 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 SCARNA20.1-201ENST00000516009 138 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AC024451.4-201ENST00000602578 752 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 RN7SL680P-201ENST00000620379 299 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AL391380.1-201ENST00000439300 1432 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AC126773.4-201ENST00000612545 3043 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 ITPK1-AS1-201ENST00000553639 4701 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 LRRC2-AS1-201ENST00000599511 2291 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 AL161891.1-201ENST00000621575 4636 ntBASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HMG20BQ9P0W2 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 RNA5SP260-201ENST00000363849 111 ntBASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 RPSAP1-201ENST00000421328 880 ntBASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 GAPDHP73-201ENST00000423411 1007 ntBASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 RPL6P2-201ENST00000425480 783 ntBASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 VDAC2P3-201ENST00000430995 828 ntBASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HMG20BQ9P0W2 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms