Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
P04436 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC6.97□□□□□ -1.29
P04436 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 RNA5SP448-201ENST00000363151 111 ntBASIC6.97□□□□□ -1.29
P04436 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 MIR301B-201ENST00000390813 78 ntBASIC6.97□□□□□ -1.29
P04436 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC6.97□□□□□ -1.29
P04436 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.97□□□□□ -1.29
P04436 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC6.97□□□□□ -1.29
P04436 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.97□□□□□ -1.29
P04436 RPL5P28-201ENST00000418634 693 ntBASIC6.97□□□□□ -1.29
P04436 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.97□□□□□ -1.29
P04436 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC6.97□□□□□ -1.29
P04436 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC6.97□□□□□ -1.29
P04436 AC114755.1-201ENST00000453101 868 ntBASIC6.97□□□□□ -1.29
P04436 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 CHIAP1-201ENST00000456220 995 ntBASIC6.97□□□□□ -1.29
P04436 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.97□□□□□ -1.29
P04436 TDGF1P6-201ENST00000463873 448 ntBASIC6.97□□□□□ -1.29
P04436 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.97□□□□□ -1.29
P04436 AC097263.1-201ENST00000496795 606 ntBASIC6.97□□□□□ -1.29
P04436 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 RN7SKP2-201ENST00000517003 319 ntBASIC6.97□□□□□ -1.29
P04436 SDHCP4-201ENST00000532834 510 ntBASIC6.97□□□□□ -1.29
P04436 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC6.97□□□□□ -1.29
P04436 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.97□□□□□ -1.29
P04436 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.97□□□□□ -1.29
P04436 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC6.97□□□□□ -1.29
P04436 RPS28P1-201ENST00000604589 187 ntBASIC6.97□□□□□ -1.29
P04436 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.97□□□□□ -1.29
P04436 GTF2IP1-202ENST00000614592 2047 ntBASIC6.97□□□□□ -1.29
P04436 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC6.97□□□□□ -1.29
P04436 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.97□□□□□ -1.29
P04436 PART1_3.1-201ENST00000619680 131 ntBASIC6.97□□□□□ -1.29
P04436 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC6.97□□□□□ -1.29
P04436 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
P04436 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
P04436 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
P04436 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC6.97□□□□□ -1.29
P04436 MFSD8-227ENST00000641393 4069 ntBASIC6.96□□□□□ -1.29
P04436 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC6.96□□□□□ -1.29
P04436 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
P04436 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
P04436 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
P04436 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.96□□□□□ -1.29
P04436 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.96□□□□□ -1.3
P04436 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 AL035555.1-201ENST00000404462 1790 ntBASIC6.96□□□□□ -1.3
P04436 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 U3.31-201ENST00000408113 216 ntBASIC6.96□□□□□ -1.3
P04436 RN7SKP207-201ENST00000411204 303 ntBASIC6.96□□□□□ -1.3
P04436 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC6.96□□□□□ -1.3
P04436 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.96□□□□□ -1.3
P04436 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.96□□□□□ -1.3
P04436 AL591379.2-201ENST00000450223 397 ntBASIC6.96□□□□□ -1.3
P04436 AC079944.1-201ENST00000485426 495 ntBASIC6.96□□□□□ -1.3
P04436 AC117383.2-201ENST00000514722 322 ntBASIC6.96□□□□□ -1.3
P04436 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.96□□□□□ -1.3
P04436 COX4I1P1-201ENST00000554239 509 ntBASIC6.96□□□□□ -1.3
P04436 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC6.96□□□□□ -1.3
P04436 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC6.96□□□□□ -1.3
P04436 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.96□□□□□ -1.3
P04436 AC007136.1-201ENST00000589141 199 ntBASIC6.96□□□□□ -1.3
P04436 AC005518.2-201ENST00000603254 282 ntBASIC6.96□□□□□ -1.3
P04436 AC016405.2-201ENST00000607393 312 ntBASIC6.96□□□□□ -1.3
P04436 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.96□□□□□ -1.3
P04436 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC6.96□□□□□ -1.3
P04436 AC002094.5-201ENST00000623773 629 ntBASIC6.96□□□□□ -1.3
P04436 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
P04436 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
P04436 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC6.96□□□□□ -1.3
P04436 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC6.96□□□□□ -1.3
P04436 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.96□□□□□ -1.3
P04436 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 AL606490.2-201ENST00000457562 1330 ntBASIC6.96□□□□□ -1.3
P04436 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
P04436 VEZF1P1-201ENST00000423931 1541 ntBASIC6.96□□□□□ -1.3
P04436 AL031123.2-201ENST00000563225 3325 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms