Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 THAP12P7-201ENST00000520248 2290 ntBASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 AL512662.1-201ENST00000624850 2251 ntBASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
C9orf40Q8IXQ3 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 RBM5-AS1-201ENST00000630404 1386 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AC023141.1-201ENST00000419418 379 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 PHBP4-201ENST00000437447 837 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 FDPSP8-201ENST00000438304 1089 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 RPL12P40-201ENST00000467028 488 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 RN7SL233P-201ENST00000469988 277 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 RN7SL58P-201ENST00000473445 294 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AC005550.2-201ENST00000476382 318 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 RNA5SP287-201ENST00000516358 103 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 MIR6829-201ENST00000620375 67 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AC002094.5-201ENST00000623773 629 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 KYNUP1-201ENST00000466683 1406 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 AC127502.2-201ENST00000602663 2351 ntBASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
C9orf40Q8IXQ3 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 CREM-214ENST00000395887 849 ntTSL 5 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 PTMAP8-201ENST00000397729 342 ntBASIC7□□□□□ -1.29
C9orf40Q8IXQ3 RNU2-5P-201ENST00000410533 180 ntBASIC7□□□□□ -1.29
C9orf40Q8IXQ3 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 RPL5P28-201ENST00000418634 693 ntBASIC7□□□□□ -1.29
C9orf40Q8IXQ3 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 CLCN3P1-201ENST00000423965 1017 ntBASIC7□□□□□ -1.29
C9orf40Q8IXQ3 RBMY2JP-201ENST00000425544 1059 ntBASIC7□□□□□ -1.29
C9orf40Q8IXQ3 SLC25A24P1-202ENST00000434803 1220 ntBASIC7□□□□□ -1.29
C9orf40Q8IXQ3 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 CDC42P2-201ENST00000448566 569 ntBASIC7□□□□□ -1.29
C9orf40Q8IXQ3 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 CREM-224ENST00000468236 582 ntTSL 3 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 RN7SL228P-201ENST00000470060 303 ntBASIC7□□□□□ -1.29
C9orf40Q8IXQ3 RN7SL332P-201ENST00000482163 254 ntBASIC7□□□□□ -1.29
C9orf40Q8IXQ3 CREM-234ENST00000484283 660 ntTSL 5 BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 RN7SL647P-201ENST00000485429 300 ntBASIC7□□□□□ -1.29
C9orf40Q8IXQ3 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7□□□□□ -1.29
C9orf40Q8IXQ3 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms