Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CDK5RAP1Q96SZ6 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 RNA5SP427-201ENST00000365323 119 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 VN1R33P-201ENST00000411800 887 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 NFU1P1-201ENST00000413128 774 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 CYP2C56P-201ENST00000440076 291 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SL91P-201ENST00000469313 291 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SL815P-201ENST00000470970 290 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 HAUS1P1-201ENST00000505275 832 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 SNORA48.9-201ENST00000516419 162 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 BTF3P1-201ENST00000522014 495 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AC090415.1-201ENST00000581877 847 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AC034229.4-201ENST00000607861 441 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 AC119674.1-221ENST00000641594 1213 ntBASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.09□□□□□ -1.11
CDK5RAP1Q96SZ6 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
CDK5RAP1Q96SZ6 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 RNA5SP79-201ENST00000365193 109 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 COQ3-202ENST00000369240 646 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 SSX9-201ENST00000376909 591 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 SNORA40.4-201ENST00000390971 128 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 SEPT7P2-202ENST00000398921 823 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 OR7E91P-201ENST00000400027 866 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 RPL36P1-201ENST00000419720 225 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AC000362.1-201ENST00000433725 425 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AC097527.1-201ENST00000437031 530 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AL590682.1-201ENST00000437248 344 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 RPL34P22-201ENST00000468193 318 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AC021269.1-201ENST00000526860 705 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AP000435.1-201ENST00000528539 496 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 PSMC1P8-201ENST00000536820 1296 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SL786P-201ENST00000579130 298 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SL237P-201ENST00000580912 287 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 MIR4258-201ENST00000580920 91 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AL592504.1-201ENST00000605319 439 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AL606760.4-201ENST00000617613 718 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AC097520.1-201ENST00000624435 385 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms