Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 MIR935-201ENST00000401179 91 ntBASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 AC008694.1-202ENST00000636953 945 ntBASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA11Q9Y5H2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA11Q9Y5H2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 SMG8-203ENST00000578922 2178 ntBASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 AC099778.1-201ENST00000568593 1911 ntBASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA11Q9Y5H2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 DPP3P2-201ENST00000416030 1696 ntBASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 CYP2T1P-201ENST00000432607 1285 ntBASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA11Q9Y5H2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 OR10C1-204ENST00000622521 1039 ntBASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDHGA11Q9Y5H2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGA11Q9Y5H2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms