Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UBE2D4Q9Y2X8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 AF213884.3-201ENST00000563833 479 ntBASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 AC093484.2-201ENST00000580996 2166 ntBASIC13.98□□□□□ -0.17
UBE2D4Q9Y2X8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 TREX1-205ENST00000625293 1783 ntBASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 AL358852.1-201ENST00000623174 1268 ntBASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBE2D4Q9Y2X8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 FAM21FP-204ENST00000608637 956 ntBASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
UBE2D4Q9Y2X8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2D4Q9Y2X8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
UBE2D4Q9Y2X8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
UBE2D4Q9Y2X8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2D4Q9Y2X8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
UBE2D4Q9Y2X8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.96□□□□□ -0.18
UBE2D4Q9Y2X8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
UBE2D4Q9Y2X8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.96□□□□□ -0.18
UBE2D4Q9Y2X8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
UBE2D4Q9Y2X8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 AIRN-201ENST00000601203 4374 ntBASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 AC007322.3-201ENST00000426526 701 ntBASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
UBE2D4Q9Y2X8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms