Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 MIR2861-201ENST00000636310 90 ntBASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCL1Q9Y2P8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 NEFHP1-201ENST00000412845 2629 ntBASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 TREX1-205ENST00000625293 1783 ntBASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCL1Q9Y2P8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 EEF1DP3-203ENST00000566025 782 ntBASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 AC093503.3-201ENST00000624917 2352 ntBASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
RCL1Q9Y2P8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms