Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 C2orf69P4-201ENST00000565394 541 ntBASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.4■□□□□ 0.54
RPH3AQ9Y2J0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPH3AQ9Y2J0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RPH3AQ9Y2J0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.54
RPH3AQ9Y2J0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
RPH3AQ9Y2J0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RPH3AQ9Y2J0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 ITM2C-210ENST00000620962 501 ntBASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RPH3AQ9Y2J0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RPH3AQ9Y2J0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 POU5F1P3-201ENST00000428824 1078 ntBASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RPH3AQ9Y2J0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms