Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 AC105020.6-201ENST00000621523 1217 ntBASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CHRNA9Q9UGM1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 AL355472.2-201ENST00000422958 438 ntBASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 AL589743.5-201ENST00000616611 1050 ntBASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRNA9Q9UGM1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHRNA9Q9UGM1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA9Q9UGM1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA9Q9UGM1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA9Q9UGM1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA9Q9UGM1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 NCF1B-203ENST00000435988 1254 ntBASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 AC083906.2-201ENST00000511578 360 ntBASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 AC090192.1-201ENST00000517740 490 ntBASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA9Q9UGM1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 GPX1P1-201ENST00000388829 606 ntBASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA9Q9UGM1 KRT17P1-201ENST00000399211 1546 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms