Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LRIT1Q9P2V4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LRIT1Q9P2V4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 AP001412.1-201ENST00000608405 714 ntBASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 AL121829.2-201ENST00000620908 328 ntBASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 AL135905.2-201ENST00000584934 1404 ntBASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.49■□□□□ 0.71
LRIT1Q9P2V4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRIT1Q9P2V4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 AC124283.5-201ENST00000624661 1809 ntBASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 PLK5-205ENST00000642079 1969 ntBASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.47■□□□□ 0.71
LRIT1Q9P2V4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 TSPY7P-201ENST00000431358 1114 ntBASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 AL049637.2-201ENST00000641778 930 ntBASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 KRT17P2-201ENST00000300992 1314 ntBASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRIT1Q9P2V4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIT1Q9P2V4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRIT1Q9P2V4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIT1Q9P2V4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.45■□□□□ 0.7
LRIT1Q9P2V4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIT1Q9P2V4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRIT1Q9P2V4 HLA-G-202ENST00000376815 851 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms