Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC3Q9NUD5 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.91■□□□□ 0.62
ZCCHC3Q9NUD5 AC008694.1-202ENST00000636953 945 ntBASIC18.91■□□□□ 0.62
ZCCHC3Q9NUD5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.91■□□□□ 0.62
ZCCHC3Q9NUD5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC3Q9NUD5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC3Q9NUD5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZCCHC3Q9NUD5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.91■□□□□ 0.62
ZCCHC3Q9NUD5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 AFG3L1P-217ENST00000557444 2447 ntBASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 TCF3P1-201ENST00000423021 1937 ntBASIC18.9■□□□□ 0.62
ZCCHC3Q9NUD5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZCCHC3Q9NUD5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.89■□□□□ 0.62
ZCCHC3Q9NUD5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZCCHC3Q9NUD5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZCCHC3Q9NUD5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 MIR935-201ENST00000401179 91 ntBASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZCCHC3Q9NUD5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.87■□□□□ 0.61
ZCCHC3Q9NUD5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.86■□□□□ 0.61
ZCCHC3Q9NUD5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms