Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
GCM1Q9NP62 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.17■□□□□ 0.34
GCM1Q9NP62 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GCM1Q9NP62 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.17■□□□□ 0.34
GCM1Q9NP62 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GCM1Q9NP62 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GCM1Q9NP62 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GCM1Q9NP62 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.17■□□□□ 0.34
GCM1Q9NP62 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
GCM1Q9NP62 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.16■□□□□ 0.34
GCM1Q9NP62 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.16■□□□□ 0.34
GCM1Q9NP62 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.16■□□□□ 0.34
GCM1Q9NP62 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GCM1Q9NP62 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.16■□□□□ 0.34
GCM1Q9NP62 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.16■□□□□ 0.34
GCM1Q9NP62 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GCM1Q9NP62 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GCM1Q9NP62 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GCM1Q9NP62 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GCM1Q9NP62 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GCM1Q9NP62 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GCM1Q9NP62 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GCM1Q9NP62 C2orf69P4-201ENST00000565394 541 ntBASIC17.15■□□□□ 0.34
GCM1Q9NP62 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GCM1Q9NP62 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GCM1Q9NP62 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GCM1Q9NP62 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
GCM1Q9NP62 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GCM1Q9NP62 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.14■□□□□ 0.33
GCM1Q9NP62 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCM1Q9NP62 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GCM1Q9NP62 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCM1Q9NP62 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCM1Q9NP62 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.14■□□□□ 0.33
GCM1Q9NP62 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.14■□□□□ 0.33
GCM1Q9NP62 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.14■□□□□ 0.33
GCM1Q9NP62 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.14■□□□□ 0.33
GCM1Q9NP62 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.14■□□□□ 0.33
GCM1Q9NP62 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
GCM1Q9NP62 AC083880.1-201ENST00000608266 535 ntBASIC17.14■□□□□ 0.33
GCM1Q9NP62 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GCM1Q9NP62 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCM1Q9NP62 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCM1Q9NP62 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCM1Q9NP62 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCM1Q9NP62 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GCM1Q9NP62 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCM1Q9NP62 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
GCM1Q9NP62 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GCM1Q9NP62 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GCM1Q9NP62 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.13■□□□□ 0.33
GCM1Q9NP62 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.13■□□□□ 0.33
GCM1Q9NP62 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.13■□□□□ 0.33
GCM1Q9NP62 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.13■□□□□ 0.33
GCM1Q9NP62 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.13■□□□□ 0.33
GCM1Q9NP62 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.13■□□□□ 0.33
GCM1Q9NP62 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCM1Q9NP62 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms