Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 RN7SL471P-201ENST00000580476 299 ntBASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 SMG8-203ENST00000578922 2178 ntBASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 RPS2P52-201ENST00000469610 820 ntBASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CSNK1G1Q9HCP0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSNK1G1Q9HCP0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSNK1G1Q9HCP0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CSNK1G1Q9HCP0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.08■□□□□ 0.96
CSNK1G1Q9HCP0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 MTDHP1-201ENST00000605323 784 ntBASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 GABARAPL3-202ENST00000624044 1851 ntBASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CSNK1G1Q9HCP0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 GCSHP5-201ENST00000443090 522 ntBASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CSNK1G1Q9HCP0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 AL121829.2-201ENST00000620908 328 ntBASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CSNK1G1Q9HCP0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CSNK1G1Q9HCP0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms