Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.33■■□□□ 1.33
VAT1LQ9HCJ6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
VAT1LQ9HCJ6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
VAT1LQ9HCJ6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
VAT1LQ9HCJ6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.33■■□□□ 1.33
VAT1LQ9HCJ6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VAT1LQ9HCJ6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VAT1LQ9HCJ6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.32
VAT1LQ9HCJ6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VAT1LQ9HCJ6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VAT1LQ9HCJ6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 DPP3P2-201ENST00000416030 1696 ntBASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 AC092720.2-201ENST00000602388 1665 ntBASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VAT1LQ9HCJ6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 AC233263.1-201ENST00000578059 224 ntBASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.31■■□□□ 1.32
VAT1LQ9HCJ6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VAT1LQ9HCJ6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 KRT17P3-201ENST00000420566 1262 ntBASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 AC120498.8-201ENST00000614275 531 ntBASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.29■■□□□ 1.32
VAT1LQ9HCJ6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.28■■□□□ 1.32
VAT1LQ9HCJ6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms