Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LRRC40Q9H9A6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 AFG3L1P-217ENST00000557444 2447 ntBASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 CYP2T3P-201ENST00000601990 817 ntBASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 AC005181.1-201ENST00000604782 1256 ntBASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRRC40Q9H9A6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 AC004911.1-201ENST00000416316 871 ntBASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 AC080038.1-201ENST00000611274 1154 ntBASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRC40Q9H9A6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 IKBKGP1-201ENST00000612193 1073 ntBASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRRC40Q9H9A6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 AC010980.2-201ENST00000587099 1412 ntBASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 BX119927.1-201ENST00000636596 1552 ntBASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRC40Q9H9A6 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRC40Q9H9A6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
LRRC40Q9H9A6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRRC40Q9H9A6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 AL512625.2-201ENST00000417533 625 ntBASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 AL137784.2-201ENST00000607332 1000 ntBASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 AC073111.5-205ENST00000641717 521 ntBASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRRC40Q9H9A6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms