Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NSUN3Q9H649 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NSUN3Q9H649 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
NSUN3Q9H649 AL390955.1-201ENST00000428694 934 ntBASIC21.38■■□□□ 1.01
NSUN3Q9H649 SLC25A3P1-201ENST00000443844 931 ntBASIC21.38■■□□□ 1.01
NSUN3Q9H649 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.38■■□□□ 1.01
NSUN3Q9H649 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
NSUN3Q9H649 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NSUN3Q9H649 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
NSUN3Q9H649 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
NSUN3Q9H649 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NSUN3Q9H649 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NSUN3Q9H649 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NSUN3Q9H649 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NSUN3Q9H649 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NSUN3Q9H649 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
NSUN3Q9H649 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NSUN3Q9H649 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NSUN3Q9H649 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NSUN3Q9H649 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.37■■□□□ 1.01
NSUN3Q9H649 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NSUN3Q9H649 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NSUN3Q9H649 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NSUN3Q9H649 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.37■■□□□ 1.01
NSUN3Q9H649 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.37■■□□□ 1.01
NSUN3Q9H649 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
NSUN3Q9H649 AC087388.1-201ENST00000571370 1112 ntBASIC21.37■■□□□ 1.01
NSUN3Q9H649 AC010947.1-201ENST00000623454 693 ntBASIC21.37■■□□□ 1.01
NSUN3Q9H649 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.37■■□□□ 1.01
NSUN3Q9H649 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.37■■□□□ 1.01
NSUN3Q9H649 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.37■■□□□ 1.01
NSUN3Q9H649 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NSUN3Q9H649 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NSUN3Q9H649 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
NSUN3Q9H649 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NSUN3Q9H649 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.37■■□□□ 1.01
NSUN3Q9H649 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NSUN3Q9H649 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NSUN3Q9H649 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NSUN3Q9H649 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NSUN3Q9H649 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.36■■□□□ 1.01
NSUN3Q9H649 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NSUN3Q9H649 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NSUN3Q9H649 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NSUN3Q9H649 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NSUN3Q9H649 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NSUN3Q9H649 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.36■■□□□ 1.01
NSUN3Q9H649 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NSUN3Q9H649 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.35■■□□□ 1.01
NSUN3Q9H649 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NSUN3Q9H649 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.35■■□□□ 1.01
NSUN3Q9H649 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NSUN3Q9H649 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
NSUN3Q9H649 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.35■■□□□ 1.01
NSUN3Q9H649 AC116562.2-201ENST00000507042 360 ntBASIC21.35■■□□□ 1.01
NSUN3Q9H649 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.35■■□□□ 1.01
NSUN3Q9H649 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NSUN3Q9H649 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.35■■□□□ 1.01
NSUN3Q9H649 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.34■■□□□ 1.01
NSUN3Q9H649 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NSUN3Q9H649 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.33■■□□□ 1.01
NSUN3Q9H649 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
NSUN3Q9H649 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NSUN3Q9H649 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
NSUN3Q9H649 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
NSUN3Q9H649 AC104076.2-201ENST00000448912 469 ntBASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms