Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCX3BQ9H321 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.15■□□□□ 0.66
VCX3BQ9H321 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.15■□□□□ 0.66
VCX3BQ9H321 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCX3BQ9H321 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.15■□□□□ 0.66
VCX3BQ9H321 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCX3BQ9H321 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
VCX3BQ9H321 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.15■□□□□ 0.66
VCX3BQ9H321 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.15■□□□□ 0.66
VCX3BQ9H321 AC074183.2-201ENST00000623112 922 ntBASIC19.15■□□□□ 0.66
VCX3BQ9H321 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VCX3BQ9H321 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
VCX3BQ9H321 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
VCX3BQ9H321 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VCX3BQ9H321 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
VCX3BQ9H321 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
VCX3BQ9H321 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VCX3BQ9H321 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VCX3BQ9H321 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.14■□□□□ 0.65
VCX3BQ9H321 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.14■□□□□ 0.65
VCX3BQ9H321 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.14■□□□□ 0.65
VCX3BQ9H321 BHLHE23-202ENST00000612929 1109 ntBASIC19.14■□□□□ 0.65
VCX3BQ9H321 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 FZD10-202ENST00000539839 3282 ntBASIC19.14■□□□□ 0.65
VCX3BQ9H321 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VCX3BQ9H321 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 AC007613.1-201ENST00000572811 2597 ntBASIC19.14■□□□□ 0.65
VCX3BQ9H321 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.14■□□□□ 0.65
VCX3BQ9H321 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
VCX3BQ9H321 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VCX3BQ9H321 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 NOC2LP1-202ENST00000452600 2235 ntBASIC19.13■□□□□ 0.65
VCX3BQ9H321 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VCX3BQ9H321 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VCX3BQ9H321 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
VCX3BQ9H321 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
VCX3BQ9H321 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
VCX3BQ9H321 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.12■□□□□ 0.65
VCX3BQ9H321 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.12■□□□□ 0.65
VCX3BQ9H321 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.12■□□□□ 0.65
VCX3BQ9H321 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
VCX3BQ9H321 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
VCX3BQ9H321 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VCX3BQ9H321 AL032819.2-201ENST00000624543 2162 ntBASIC19.12■□□□□ 0.65
VCX3BQ9H321 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
VCX3BQ9H321 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VCX3BQ9H321 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms