Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH11XQ9BZA7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH11XQ9BZA7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC26.27■■□□□ 1.8
PCDH11XQ9BZA7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH11XQ9BZA7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH11XQ9BZA7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDH11XQ9BZA7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDH11XQ9BZA7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
PCDH11XQ9BZA7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 MIR1238-201ENST00000408483 83 ntBASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 AC005363.2-201ENST00000618631 242 ntBASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDH11XQ9BZA7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 KSR1P1-201ENST00000446298 240 ntBASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDH11XQ9BZA7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 AC116562.2-201ENST00000507042 360 ntBASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDH11XQ9BZA7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 KRT8P20-201ENST00000423953 1409 ntBASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 AC113347.1-201ENST00000413321 391 ntBASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 AL049796.1-201ENST00000565336 1766 ntBASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 AC121338.2-201ENST00000622535 1744 ntBASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 KRT16P1-201ENST00000399124 1418 ntBASIC26.23■■□□□ 1.79
PCDH11XQ9BZA7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 AC005521.1-201ENST00000393351 872 ntBASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 FITM1-202ENST00000559294 800 ntBASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
PCDH11XQ9BZA7 AL024507.2-201ENST00000606070 2574 ntBASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 AL390955.1-201ENST00000428694 934 ntBASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 AL049597.2-201ENST00000565575 961 ntBASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 CR392000.1-201ENST00000624770 1228 ntBASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 LINC01568-207ENST00000641790 1380 ntBASIC26.21■■□□□ 1.79
PCDH11XQ9BZA7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC26.2■■□□□ 1.79
PCDH11XQ9BZA7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PCDH11XQ9BZA7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC26.2■■□□□ 1.79
PCDH11XQ9BZA7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms