Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 KRT18P5-201ENST00000436075 1291 ntBASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 AC243732.1-201ENST00000612648 864 ntBASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 MYCNOS-205ENST00000641950 531 ntBASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.93■□□□□ 0.14
CHRDL1Q9BU40 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 AC091799.1-201ENST00000422823 811 ntBASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 AC027702.1-201ENST00000563810 1770 ntBASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRDL1Q9BU40 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRDL1Q9BU40 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRDL1Q9BU40 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms