Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDCA3Q99618 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDCA3Q99618 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDCA3Q99618 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.07■□□□□ 0.96
CDCA3Q99618 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDCA3Q99618 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDCA3Q99618 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.07■□□□□ 0.96
CDCA3Q99618 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.07■□□□□ 0.96
CDCA3Q99618 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.07■□□□□ 0.96
CDCA3Q99618 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.07■□□□□ 0.96
CDCA3Q99618 C2orf69P3-201ENST00000565542 1120 ntBASIC21.07■□□□□ 0.96
CDCA3Q99618 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.07■□□□□ 0.96
CDCA3Q99618 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDCA3Q99618 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.07■□□□□ 0.96
CDCA3Q99618 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDCA3Q99618 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDCA3Q99618 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CDCA3Q99618 FSCN1P1-201ENST00000568912 1481 ntBASIC21.07■□□□□ 0.96
CDCA3Q99618 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDCA3Q99618 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.06■□□□□ 0.96
CDCA3Q99618 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDCA3Q99618 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDCA3Q99618 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDCA3Q99618 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
CDCA3Q99618 LIN28AP1-201ENST00000429574 405 ntBASIC21.06■□□□□ 0.96
CDCA3Q99618 AC104076.2-201ENST00000448912 469 ntBASIC21.06■□□□□ 0.96
CDCA3Q99618 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.06■□□□□ 0.96
CDCA3Q99618 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.06■□□□□ 0.96
CDCA3Q99618 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.06■□□□□ 0.96
CDCA3Q99618 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.06■□□□□ 0.96
CDCA3Q99618 AC087388.1-201ENST00000571370 1112 ntBASIC21.06■□□□□ 0.96
CDCA3Q99618 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CDCA3Q99618 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDCA3Q99618 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDCA3Q99618 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDCA3Q99618 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDCA3Q99618 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDCA3Q99618 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDCA3Q99618 KRT8P20-201ENST00000423953 1409 ntBASIC21.05■□□□□ 0.96
CDCA3Q99618 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDCA3Q99618 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDCA3Q99618 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDCA3Q99618 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDCA3Q99618 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDCA3Q99618 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDCA3Q99618 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDCA3Q99618 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.05■□□□□ 0.96
CDCA3Q99618 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
CDCA3Q99618 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.05■□□□□ 0.96
CDCA3Q99618 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.05■□□□□ 0.96
CDCA3Q99618 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDCA3Q99618 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.05■□□□□ 0.96
CDCA3Q99618 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.05■□□□□ 0.96
CDCA3Q99618 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDCA3Q99618 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.04■□□□□ 0.96
CDCA3Q99618 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDCA3Q99618 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDCA3Q99618 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDCA3Q99618 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.04■□□□□ 0.96
CDCA3Q99618 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.04■□□□□ 0.96
CDCA3Q99618 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
CDCA3Q99618 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDCA3Q99618 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.04■□□□□ 0.96
CDCA3Q99618 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.04■□□□□ 0.96
CDCA3Q99618 AP005242.2-201ENST00000580065 1175 ntBASIC21.04■□□□□ 0.96
CDCA3Q99618 DGCR10-201ENST00000609839 495 ntBASIC21.04■□□□□ 0.96
CDCA3Q99618 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.04■□□□□ 0.96
CDCA3Q99618 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDCA3Q99618 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDCA3Q99618 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDCA3Q99618 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDCA3Q99618 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDCA3Q99618 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDCA3Q99618 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDCA3Q99618 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.03■□□□□ 0.96
CDCA3Q99618 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.03■□□□□ 0.96
CDCA3Q99618 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDCA3Q99618 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.03■□□□□ 0.96
CDCA3Q99618 ATP5G1P1-201ENST00000448724 379 ntBASIC21.03■□□□□ 0.96
CDCA3Q99618 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.03■□□□□ 0.96
CDCA3Q99618 EGLN1P1-201ENST00000531623 762 ntBASIC21.03■□□□□ 0.96
CDCA3Q99618 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.03■□□□□ 0.96
CDCA3Q99618 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.03■□□□□ 0.96
CDCA3Q99618 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.03■□□□□ 0.96
CDCA3Q99618 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.03■□□□□ 0.96
CDCA3Q99618 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDCA3Q99618 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDCA3Q99618 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDCA3Q99618 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.02■□□□□ 0.96
CDCA3Q99618 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.02■□□□□ 0.96
CDCA3Q99618 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDCA3Q99618 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.02■□□□□ 0.96
CDCA3Q99618 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.02■□□□□ 0.96
CDCA3Q99618 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CDCA3Q99618 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDCA3Q99618 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDCA3Q99618 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.02■□□□□ 0.96
CDCA3Q99618 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.02■□□□□ 0.96
CDCA3Q99618 AL445675.2-201ENST00000620291 557 ntBASIC21.02■□□□□ 0.96
CDCA3Q99618 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms