Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
SPENQ96T58 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.27■□□□□ 0.52
SPENQ96T58 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.27■□□□□ 0.52
SPENQ96T58 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPENQ96T58 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.27■□□□□ 0.52
SPENQ96T58 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.27■□□□□ 0.52
SPENQ96T58 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SPENQ96T58 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPENQ96T58 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
SPENQ96T58 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPENQ96T58 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPENQ96T58 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPENQ96T58 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.27■□□□□ 0.52
SPENQ96T58 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPENQ96T58 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.27■□□□□ 0.52
SPENQ96T58 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPENQ96T58 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPENQ96T58 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.27■□□□□ 0.51
SPENQ96T58 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SPENQ96T58 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPENQ96T58 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPENQ96T58 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SPENQ96T58 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SPENQ96T58 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.26■□□□□ 0.51
SPENQ96T58 DUX4L26-201ENST00000489078 1255 ntBASIC18.26■□□□□ 0.51
SPENQ96T58 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.26■□□□□ 0.51
SPENQ96T58 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.26■□□□□ 0.51
SPENQ96T58 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPENQ96T58 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPENQ96T58 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPENQ96T58 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.26■□□□□ 0.51
SPENQ96T58 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.26■□□□□ 0.51
SPENQ96T58 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.26■□□□□ 0.51
SPENQ96T58 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.26■□□□□ 0.51
SPENQ96T58 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPENQ96T58 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPENQ96T58 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPENQ96T58 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.26■□□□□ 0.51
SPENQ96T58 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.25■□□□□ 0.51
SPENQ96T58 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPENQ96T58 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPENQ96T58 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.25■□□□□ 0.51
SPENQ96T58 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
SPENQ96T58 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPENQ96T58 INGX-201ENST00000359239 846 ntBASIC18.25■□□□□ 0.51
SPENQ96T58 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SPENQ96T58 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPENQ96T58 KRT18P22-201ENST00000402024 1347 ntBASIC18.25■□□□□ 0.51
SPENQ96T58 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SPENQ96T58 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.25■□□□□ 0.51
SPENQ96T58 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPENQ96T58 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SPENQ96T58 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.25■□□□□ 0.51
SPENQ96T58 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPENQ96T58 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPENQ96T58 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.25■□□□□ 0.51
SPENQ96T58 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SPENQ96T58 FBXW4P1-201ENST00000426721 2239 ntBASIC18.24■□□□□ 0.51
SPENQ96T58 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPENQ96T58 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SPENQ96T58 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.24■□□□□ 0.51
SPENQ96T58 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPENQ96T58 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SPENQ96T58 NBPF21P-201ENST00000425093 1451 ntBASIC18.24■□□□□ 0.51
SPENQ96T58 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPENQ96T58 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.24■□□□□ 0.51
SPENQ96T58 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SPENQ96T58 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SPENQ96T58 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.24■□□□□ 0.51
SPENQ96T58 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.24■□□□□ 0.51
SPENQ96T58 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SPENQ96T58 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SPENQ96T58 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPENQ96T58 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.24■□□□□ 0.51
SPENQ96T58 AC005363.2-201ENST00000618631 242 ntBASIC18.24■□□□□ 0.51
SPENQ96T58 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.24■□□□□ 0.51
SPENQ96T58 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SPENQ96T58 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.24■□□□□ 0.51
SPENQ96T58 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPENQ96T58 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.24■□□□□ 0.51
SPENQ96T58 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPENQ96T58 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPENQ96T58 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPENQ96T58 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPENQ96T58 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.23■□□□□ 0.51
SPENQ96T58 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPENQ96T58 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SPENQ96T58 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPENQ96T58 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPENQ96T58 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPENQ96T58 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPENQ96T58 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SPENQ96T58 AC009947.2-201ENST00000444014 672 ntBASIC18.23■□□□□ 0.51
SPENQ96T58 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
SPENQ96T58 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.23■□□□□ 0.51
SPENQ96T58 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SPENQ96T58 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPENQ96T58 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPENQ96T58 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPENQ96T58 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms