Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NEK1Q96PY6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NEK1Q96PY6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NEK1Q96PY6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.85■■□□□ 1.41
NEK1Q96PY6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NEK1Q96PY6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NEK1Q96PY6 TCF3P1-201ENST00000423021 1937 ntBASIC23.85■■□□□ 1.41
NEK1Q96PY6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.85■■□□□ 1.41
NEK1Q96PY6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.85■■□□□ 1.41
NEK1Q96PY6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NEK1Q96PY6 AL121832.2-201ENST00000610979 668 ntBASIC23.85■■□□□ 1.41
NEK1Q96PY6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.85■■□□□ 1.41
NEK1Q96PY6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.85■■□□□ 1.41
NEK1Q96PY6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.85■■□□□ 1.41
NEK1Q96PY6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEK1Q96PY6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEK1Q96PY6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NEK1Q96PY6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEK1Q96PY6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEK1Q96PY6 LSM12P1-201ENST00000411836 588 ntBASIC23.84■■□□□ 1.41
NEK1Q96PY6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.84■■□□□ 1.41
NEK1Q96PY6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.84■■□□□ 1.41
NEK1Q96PY6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
NEK1Q96PY6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEK1Q96PY6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NEK1Q96PY6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
NEK1Q96PY6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.83■■□□□ 1.41
NEK1Q96PY6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEK1Q96PY6 BX119927.1-201ENST00000636596 1552 ntBASIC23.83■■□□□ 1.41
NEK1Q96PY6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEK1Q96PY6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NEK1Q96PY6 BX276092.2-201ENST00000417668 665 ntBASIC23.83■■□□□ 1.41
NEK1Q96PY6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.83■■□□□ 1.41
NEK1Q96PY6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.83■■□□□ 1.41
NEK1Q96PY6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.83■■□□□ 1.41
NEK1Q96PY6 C2orf69P4-201ENST00000565394 541 ntBASIC23.83■■□□□ 1.41
NEK1Q96PY6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
NEK1Q96PY6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
NEK1Q96PY6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NEK1Q96PY6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.83■■□□□ 1.4
NEK1Q96PY6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NEK1Q96PY6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEK1Q96PY6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
NEK1Q96PY6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NEK1Q96PY6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.82■■□□□ 1.4
NEK1Q96PY6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NEK1Q96PY6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
NEK1Q96PY6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.82■■□□□ 1.4
NEK1Q96PY6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.82■■□□□ 1.4
NEK1Q96PY6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEK1Q96PY6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
NEK1Q96PY6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEK1Q96PY6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEK1Q96PY6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEK1Q96PY6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
NEK1Q96PY6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NEK1Q96PY6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.82■■□□□ 1.4
NEK1Q96PY6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.82■■□□□ 1.4
NEK1Q96PY6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.81■■□□□ 1.4
NEK1Q96PY6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NEK1Q96PY6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NEK1Q96PY6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.81■■□□□ 1.4
NEK1Q96PY6 NCF1B-203ENST00000435988 1254 ntBASIC23.81■■□□□ 1.4
NEK1Q96PY6 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.81■■□□□ 1.4
NEK1Q96PY6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.81■■□□□ 1.4
NEK1Q96PY6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.81■■□□□ 1.4
NEK1Q96PY6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.81■■□□□ 1.4
NEK1Q96PY6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.81■■□□□ 1.4
NEK1Q96PY6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
NEK1Q96PY6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEK1Q96PY6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
NEK1Q96PY6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEK1Q96PY6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NEK1Q96PY6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NEK1Q96PY6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEK1Q96PY6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEK1Q96PY6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEK1Q96PY6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NEK1Q96PY6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.8■■□□□ 1.4
NEK1Q96PY6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.8■■□□□ 1.4
NEK1Q96PY6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEK1Q96PY6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.8■■□□□ 1.4
NEK1Q96PY6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.8■■□□□ 1.4
NEK1Q96PY6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NEK1Q96PY6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.8■■□□□ 1.4
NEK1Q96PY6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.8■■□□□ 1.4
NEK1Q96PY6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEK1Q96PY6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NEK1Q96PY6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEK1Q96PY6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.79■■□□□ 1.4
NEK1Q96PY6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEK1Q96PY6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEK1Q96PY6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.79■■□□□ 1.4
NEK1Q96PY6 MIPEPP3-201ENST00000412105 444 ntBASIC23.79■■□□□ 1.4
NEK1Q96PY6 GUSBP6-202ENST00000438529 1198 ntBASIC23.79■■□□□ 1.4
NEK1Q96PY6 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.79■■□□□ 1.4
NEK1Q96PY6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NEK1Q96PY6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NEK1Q96PY6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NEK1Q96PY6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms