Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC46A1Q96NT5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SLC46A1Q96NT5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC46A1Q96NT5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC46A1Q96NT5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC46A1Q96NT5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC46A1Q96NT5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 AC026471.5-201ENST00000615068 467 ntBASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC46A1Q96NT5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 AP003071.4-201ENST00000562276 1284 ntBASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 CD177P1-201ENST00000606252 935 ntBASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 AL353708.3-201ENST00000610272 989 ntBASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC46A1Q96NT5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC46A1Q96NT5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC46A1Q96NT5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SLC46A1Q96NT5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC46A1Q96NT5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC46A1Q96NT5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms