Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.18■□□□□ 0.18
RITA1Q96K30 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RITA1Q96K30 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.18■□□□□ 0.18
RITA1Q96K30 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RITA1Q96K30 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.17■□□□□ 0.18
RITA1Q96K30 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RITA1Q96K30 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RITA1Q96K30 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RITA1Q96K30 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 LSM12P1-201ENST00000411836 588 ntBASIC16.17■□□□□ 0.18
RITA1Q96K30 MIPEPP3-201ENST00000412105 444 ntBASIC16.17■□□□□ 0.18
RITA1Q96K30 GUSBP6-202ENST00000438529 1198 ntBASIC16.17■□□□□ 0.18
RITA1Q96K30 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.17■□□□□ 0.18
RITA1Q96K30 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.17■□□□□ 0.18
RITA1Q96K30 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.17■□□□□ 0.18
RITA1Q96K30 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 AL589743.5-201ENST00000616611 1050 ntBASIC16.17■□□□□ 0.18
RITA1Q96K30 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.17■□□□□ 0.18
RITA1Q96K30 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
RITA1Q96K30 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RITA1Q96K30 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RITA1Q96K30 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RITA1Q96K30 PTBP1P-201ENST00000554374 1601 ntBASIC16.16■□□□□ 0.18
RITA1Q96K30 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RITA1Q96K30 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RITA1Q96K30 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RITA1Q96K30 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
RITA1Q96K30 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RITA1Q96K30 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RITA1Q96K30 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.16■□□□□ 0.18
RITA1Q96K30 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.16■□□□□ 0.18
RITA1Q96K30 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RITA1Q96K30 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RITA1Q96K30 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.16■□□□□ 0.18
RITA1Q96K30 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RITA1Q96K30 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.15■□□□□ 0.18
RITA1Q96K30 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.15■□□□□ 0.18
RITA1Q96K30 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RITA1Q96K30 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RITA1Q96K30 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RITA1Q96K30 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RITA1Q96K30 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RITA1Q96K30 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RITA1Q96K30 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RITA1Q96K30 GPX1P1-201ENST00000388829 606 ntBASIC16.15■□□□□ 0.18
RITA1Q96K30 TSPY6P-201ENST00000448518 926 ntBASIC16.15■□□□□ 0.18
RITA1Q96K30 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.15■□□□□ 0.18
RITA1Q96K30 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.15■□□□□ 0.18
RITA1Q96K30 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RITA1Q96K30 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RITA1Q96K30 C2orf69P4-201ENST00000565394 541 ntBASIC16.15■□□□□ 0.18
RITA1Q96K30 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RITA1Q96K30 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RITA1Q96K30 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RITA1Q96K30 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RITA1Q96K30 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.15■□□□□ 0.18
RITA1Q96K30 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.15■□□□□ 0.18
RITA1Q96K30 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RITA1Q96K30 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RITA1Q96K30 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RITA1Q96K30 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RITA1Q96K30 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RITA1Q96K30 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.14■□□□□ 0.17
RITA1Q96K30 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.14■□□□□ 0.17
RITA1Q96K30 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.14■□□□□ 0.17
RITA1Q96K30 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RITA1Q96K30 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.14■□□□□ 0.17
RITA1Q96K30 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RITA1Q96K30 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.14■□□□□ 0.17
RITA1Q96K30 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RITA1Q96K30 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
RITA1Q96K30 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RITA1Q96K30 TCF3P1-201ENST00000423021 1937 ntBASIC16.13■□□□□ 0.17
RITA1Q96K30 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms