Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.13■□□□□ 0.33
SPG11Q96JI7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPG11Q96JI7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 CRYGFP-201ENST00000418459 633 ntBASIC17.12■□□□□ 0.33
SPG11Q96JI7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.12■□□□□ 0.33
SPG11Q96JI7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SPG11Q96JI7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
SPG11Q96JI7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SPG11Q96JI7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.12■□□□□ 0.33
SPG11Q96JI7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.12■□□□□ 0.33
SPG11Q96JI7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.12■□□□□ 0.33
SPG11Q96JI7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SPG11Q96JI7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.12■□□□□ 0.33
SPG11Q96JI7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.12■□□□□ 0.33
SPG11Q96JI7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SPG11Q96JI7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SPG11Q96JI7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.11■□□□□ 0.33
SPG11Q96JI7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SPG11Q96JI7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.11■□□□□ 0.33
SPG11Q96JI7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.11■□□□□ 0.33
SPG11Q96JI7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SPG11Q96JI7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SPG11Q96JI7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SPG11Q96JI7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 GPALPP1-207ENST00000611650 899 ntBASIC17.1■□□□□ 0.33
SPG11Q96JI7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.1■□□□□ 0.33
SPG11Q96JI7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SPG11Q96JI7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPG11Q96JI7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 NIFKP9-201ENST00000419265 221 ntBASIC17.09■□□□□ 0.33
SPG11Q96JI7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.09■□□□□ 0.33
SPG11Q96JI7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPG11Q96JI7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms