Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.22■□□□□ 0.83
CHMP6Q96FZ7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHMP6Q96FZ7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 SLC47A1P1-202ENST00000449666 945 ntBASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 AP005435.1-201ENST00000529293 1178 ntBASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 AL691432.2-201ENST00000607222 2038 ntBASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHMP6Q96FZ7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 AL136162.1-201ENST00000607711 1078 ntBASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 AC120498.9-201ENST00000339021 3867 ntBASIC20.19■□□□□ 0.82
CHMP6Q96FZ7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CHMP6Q96FZ7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 AC007613.1-201ENST00000572811 2597 ntBASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 MIR4767-201ENST00000582827 78 ntBASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CHMP6Q96FZ7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms