Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 IRS3P-201ENST00000223076 1006 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 AC091799.1-201ENST00000422823 811 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 DUX4L2-201ENST00000561772 1275 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 MIR6084-201ENST00000622012 110 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 DUX4L6-201ENST00000626483 1275 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 DUX4L1-201ENST00000627662 1275 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 DUX4L8-201ENST00000629013 1275 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 DUX4L3-201ENST00000630187 1275 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 DUX4L7-201ENST00000630678 1275 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 DUX4L5-201ENST00000630834 1275 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 AC004408.2-201ENST00000623613 2777 ntBASIC19.11■□□□□ 0.65
LRRC58Q96CX6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC58Q96CX6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 AC007322.3-201ENST00000426526 701 ntBASIC19.1■□□□□ 0.65
LRRC58Q96CX6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC58Q96CX6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC58Q96CX6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRC58Q96CX6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.08■□□□□ 0.65
LRRC58Q96CX6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
LRRC58Q96CX6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.08■□□□□ 0.65
LRRC58Q96CX6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LRRC58Q96CX6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LRRC58Q96CX6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.08■□□□□ 0.65
LRRC58Q96CX6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LRRC58Q96CX6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC58Q96CX6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC58Q96CX6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC58Q96CX6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LRRC58Q96CX6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRC58Q96CX6 FAM21FP-204ENST00000608637 956 ntBASIC19.08■□□□□ 0.64
LRRC58Q96CX6 AC110285.6-201ENST00000617652 491 ntBASIC19.08■□□□□ 0.64
LRRC58Q96CX6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.08■□□□□ 0.64
LRRC58Q96CX6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRC58Q96CX6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRRC58Q96CX6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRC58Q96CX6 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.08■□□□□ 0.64
LRRC58Q96CX6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.07■□□□□ 0.64
LRRC58Q96CX6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms