Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3S1Q92572 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3S1Q92572 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.71■□□□□ 0.43
AP3S1Q92572 AC092171.4-201ENST00000609130 632 ntBASIC17.71■□□□□ 0.43
AP3S1Q92572 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3S1Q92572 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3S1Q92572 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
AP3S1Q92572 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
AP3S1Q92572 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
AP3S1Q92572 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.71■□□□□ 0.42
AP3S1Q92572 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
AP3S1Q92572 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
AP3S1Q92572 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.7■□□□□ 0.42
AP3S1Q92572 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
AP3S1Q92572 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
AP3S1Q92572 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.7■□□□□ 0.42
AP3S1Q92572 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.7■□□□□ 0.42
AP3S1Q92572 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.69■□□□□ 0.42
AP3S1Q92572 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
AP3S1Q92572 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
AP3S1Q92572 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.69■□□□□ 0.42
AP3S1Q92572 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
AP3S1Q92572 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.69■□□□□ 0.42
AP3S1Q92572 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3S1Q92572 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3S1Q92572 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.69■□□□□ 0.42
AP3S1Q92572 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP3S1Q92572 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.68■□□□□ 0.42
AP3S1Q92572 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
AP3S1Q92572 AL138781.2-201ENST00000617896 1843 ntBASIC17.68■□□□□ 0.42
AP3S1Q92572 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
AP3S1Q92572 AC009237.3-201ENST00000393279 1427 ntBASIC17.68■□□□□ 0.42
AP3S1Q92572 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
AP3S1Q92572 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.68■□□□□ 0.42
AP3S1Q92572 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.68■□□□□ 0.42
AP3S1Q92572 MIR4787-201ENST00000607364 84 ntBASIC17.68■□□□□ 0.42
AP3S1Q92572 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
AP3S1Q92572 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
AP3S1Q92572 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP3S1Q92572 AP004607.4-201ENST00000530158 1459 ntBASIC17.68■□□□□ 0.42
AP3S1Q92572 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
AP3S1Q92572 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.68■□□□□ 0.42
AP3S1Q92572 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.67■□□□□ 0.42
AP3S1Q92572 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AP3S1Q92572 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3S1Q92572 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.67■□□□□ 0.42
AP3S1Q92572 AL691432.2-201ENST00000607222 2038 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms