Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.63■□□□□ 0.73
ATL1Q8WXF7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 AL355472.2-201ENST00000422958 438 ntBASIC19.62■□□□□ 0.73
ATL1Q8WXF7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 AC006970.2-201ENST00000450065 779 ntBASIC19.62■□□□□ 0.73
ATL1Q8WXF7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 AC105036.2-201ENST00000569468 176 ntBASIC19.62■□□□□ 0.73
ATL1Q8WXF7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.62■□□□□ 0.73
ATL1Q8WXF7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 MKRN4P-201ENST00000444706 1521 ntBASIC19.61■□□□□ 0.73
ATL1Q8WXF7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 CROCCP5-201ENST00000436658 830 ntBASIC19.61■□□□□ 0.73
ATL1Q8WXF7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.61■□□□□ 0.73
ATL1Q8WXF7 AC092666.2-201ENST00000613287 246 ntBASIC19.61■□□□□ 0.73
ATL1Q8WXF7 AL050303.2-201ENST00000619798 666 ntBASIC19.61■□□□□ 0.73
ATL1Q8WXF7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 SMG8-203ENST00000578922 2178 ntBASIC19.61■□□□□ 0.73
ATL1Q8WXF7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ATL1Q8WXF7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 LSM12P1-201ENST00000411836 588 ntBASIC19.6■□□□□ 0.73
ATL1Q8WXF7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATL1Q8WXF7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.59■□□□□ 0.73
ATL1Q8WXF7 AL121832.2-201ENST00000610979 668 ntBASIC19.59■□□□□ 0.73
ATL1Q8WXF7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms