Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
SVIPQ8NHG7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 AC073314.1-201ENST00000568729 2216 ntBASIC12.72□□□□□ -0.37
SVIPQ8NHG7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SVIPQ8NHG7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 AC022144.1-201ENST00000602255 1580 ntBASIC12.71□□□□□ -0.37
SVIPQ8NHG7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SVIPQ8NHG7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SVIPQ8NHG7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 AL139385.1-201ENST00000611744 3272 ntBASIC12.7□□□□□ -0.38
SVIPQ8NHG7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 AFG3L1P-217ENST00000557444 2447 ntBASIC12.7□□□□□ -0.38
SVIPQ8NHG7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SVIPQ8NHG7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms