Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TRIM58Q8NG06 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
TRIM58Q8NG06 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
TRIM58Q8NG06 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM58Q8NG06 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM58Q8NG06 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM58Q8NG06 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 IRS3P-201ENST00000223076 1006 ntBASIC21.34■■□□□ 1.01
TRIM58Q8NG06 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 AC091799.1-201ENST00000422823 811 ntBASIC21.34■■□□□ 1.01
TRIM58Q8NG06 AC007322.3-201ENST00000426526 701 ntBASIC21.34■■□□□ 1.01
TRIM58Q8NG06 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TRIM58Q8NG06 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 AC243732.1-201ENST00000612648 864 ntBASIC21.33■■□□□ 1.01
TRIM58Q8NG06 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM58Q8NG06 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.33■■□□□ 1
TRIM58Q8NG06 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM58Q8NG06 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM58Q8NG06 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRIM58Q8NG06 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.32■■□□□ 1
TRIM58Q8NG06 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TRIM58Q8NG06 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TRIM58Q8NG06 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.32■■□□□ 1
TRIM58Q8NG06 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.32■■□□□ 1
TRIM58Q8NG06 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.32■■□□□ 1
TRIM58Q8NG06 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 CCDC92B-201ENST00000575506 885 ntBASIC21.32■■□□□ 1
TRIM58Q8NG06 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.32■■□□□ 1
TRIM58Q8NG06 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TRIM58Q8NG06 AL031432.3-201ENST00000607698 485 ntBASIC21.32■■□□□ 1
TRIM58Q8NG06 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.32■■□□□ 1
TRIM58Q8NG06 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM58Q8NG06 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.31■■□□□ 1
TRIM58Q8NG06 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM58Q8NG06 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM58Q8NG06 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.31■■□□□ 1
TRIM58Q8NG06 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM58Q8NG06 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM58Q8NG06 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM58Q8NG06 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TRIM58Q8NG06 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM58Q8NG06 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.31■■□□□ 1
TRIM58Q8NG06 MIR6084-201ENST00000622012 110 ntBASIC21.31■■□□□ 1
TRIM58Q8NG06 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TRIM58Q8NG06 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM58Q8NG06 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM58Q8NG06 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM58Q8NG06 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.31■■□□□ 1
TRIM58Q8NG06 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
TRIM58Q8NG06 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM58Q8NG06 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM58Q8NG06 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.3■■□□□ 1
TRIM58Q8NG06 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM58Q8NG06 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.3■■□□□ 1
TRIM58Q8NG06 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.3■■□□□ 1
TRIM58Q8NG06 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.3■■□□□ 1
TRIM58Q8NG06 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM58Q8NG06 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM58Q8NG06 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.3■■□□□ 1
TRIM58Q8NG06 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.3■■□□□ 1
TRIM58Q8NG06 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM58Q8NG06 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms