Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DNAAF1Q8NEP3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.64■□□□□ 0.42
DNAAF1Q8NEP3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.64■□□□□ 0.42
DNAAF1Q8NEP3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
DNAAF1Q8NEP3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
DNAAF1Q8NEP3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
DNAAF1Q8NEP3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
DNAAF1Q8NEP3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
DNAAF1Q8NEP3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 KRT18P20-201ENST00000548986 1279 ntBASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.64■□□□□ 0.41
DNAAF1Q8NEP3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 AC098818.2-201ENST00000564925 2320 ntBASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 YBX1P1-201ENST00000445822 960 ntBASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 TERF1P2-201ENST00000583350 1212 ntBASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DNAAF1Q8NEP3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 CCDC92B-201ENST00000575506 885 ntBASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DNAAF1Q8NEP3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DNAAF1Q8NEP3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DNAAF1Q8NEP3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.61■□□□□ 0.41
DNAAF1Q8NEP3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DNAAF1Q8NEP3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms