Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.64■□□□□ 0.89
SIX5Q8N196 AC104076.2-201ENST00000448912 469 ntBASIC20.64■□□□□ 0.89
SIX5Q8N196 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.64■□□□□ 0.89
SIX5Q8N196 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.64■□□□□ 0.89
SIX5Q8N196 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SIX5Q8N196 AC010947.1-201ENST00000623454 693 ntBASIC20.64■□□□□ 0.89
SIX5Q8N196 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.64■□□□□ 0.89
SIX5Q8N196 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIX5Q8N196 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SIX5Q8N196 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SIX5Q8N196 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SIX5Q8N196 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SIX5Q8N196 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIX5Q8N196 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SIX5Q8N196 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SIX5Q8N196 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIX5Q8N196 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIX5Q8N196 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.63■□□□□ 0.89
SIX5Q8N196 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIX5Q8N196 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.63■□□□□ 0.89
SIX5Q8N196 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SIX5Q8N196 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.63■□□□□ 0.89
SIX5Q8N196 FITM1-202ENST00000559294 800 ntBASIC20.63■□□□□ 0.89
SIX5Q8N196 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.63■□□□□ 0.89
SIX5Q8N196 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SIX5Q8N196 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SIX5Q8N196 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIX5Q8N196 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SIX5Q8N196 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SIX5Q8N196 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.63■□□□□ 0.89
SIX5Q8N196 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.63■□□□□ 0.89
SIX5Q8N196 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SIX5Q8N196 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX5Q8N196 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.62■□□□□ 0.89
SIX5Q8N196 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SIX5Q8N196 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX5Q8N196 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX5Q8N196 SLC25A24-204ENST00000569674 2357 ntBASIC20.62■□□□□ 0.89
SIX5Q8N196 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX5Q8N196 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX5Q8N196 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.62■□□□□ 0.89
SIX5Q8N196 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.62■□□□□ 0.89
SIX5Q8N196 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.62■□□□□ 0.89
SIX5Q8N196 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.62■□□□□ 0.89
SIX5Q8N196 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.62■□□□□ 0.89
SIX5Q8N196 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SIX5Q8N196 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX5Q8N196 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.62■□□□□ 0.89
SIX5Q8N196 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX5Q8N196 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX5Q8N196 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.61■□□□□ 0.89
SIX5Q8N196 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
SIX5Q8N196 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIX5Q8N196 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SIX5Q8N196 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.61■□□□□ 0.89
SIX5Q8N196 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.61■□□□□ 0.89
SIX5Q8N196 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.61■□□□□ 0.89
SIX5Q8N196 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SIX5Q8N196 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.61■□□□□ 0.89
SIX5Q8N196 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIX5Q8N196 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SIX5Q8N196 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.61■□□□□ 0.89
SIX5Q8N196 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIX5Q8N196 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIX5Q8N196 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIX5Q8N196 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.6■□□□□ 0.89
SIX5Q8N196 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIX5Q8N196 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.6■□□□□ 0.89
SIX5Q8N196 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.6■□□□□ 0.89
SIX5Q8N196 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SIX5Q8N196 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.6■□□□□ 0.89
SIX5Q8N196 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIX5Q8N196 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.6■□□□□ 0.89
SIX5Q8N196 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIX5Q8N196 AL121906.2-201ENST00000621597 723 ntBASIC20.6■□□□□ 0.89
SIX5Q8N196 CR392000.1-201ENST00000624770 1228 ntBASIC20.6■□□□□ 0.89
SIX5Q8N196 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.6■□□□□ 0.89
SIX5Q8N196 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIX5Q8N196 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIX5Q8N196 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SIX5Q8N196 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SIX5Q8N196 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.59■□□□□ 0.89
SIX5Q8N196 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIX5Q8N196 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX5Q8N196 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.59■□□□□ 0.89
SIX5Q8N196 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIX5Q8N196 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX5Q8N196 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX5Q8N196 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.59■□□□□ 0.89
SIX5Q8N196 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.59■□□□□ 0.89
SIX5Q8N196 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.59■□□□□ 0.89
SIX5Q8N196 WWOX-216ENST00000569818 525 ntBASIC20.59■□□□□ 0.89
SIX5Q8N196 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.59■□□□□ 0.89
SIX5Q8N196 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX5Q8N196 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX5Q8N196 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX5Q8N196 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIX5Q8N196 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX5Q8N196 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIX5Q8N196 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms