Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEFF1Q8IYR6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 AL353807.1-201ENST00000427475 662 ntBASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEFF1Q8IYR6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 KRT18P35-201ENST00000510488 1269 ntBASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 MIR6786-201ENST00000616843 113 ntBASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.05■□□□□ 0.8
TMEFF1Q8IYR6 AC011484.1-201ENST00000377652 1995 ntBASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 ARMC10P1-201ENST00000313754 855 ntBASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 AC023632.3-201ENST00000521633 145 ntBASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 AC073195.1-201ENST00000607241 877 ntBASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 AC079834.2-201ENST00000609776 1949 ntBASIC20.04■□□□□ 0.8
TMEFF1Q8IYR6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEFF1Q8IYR6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms