Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VPS13BQ7Z7G8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 AC011484.1-201ENST00000377652 1995 ntBASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 FBXW4P1-201ENST00000426721 2239 ntBASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 AL356652.1-201ENST00000615962 565 ntBASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13BQ7Z7G8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC12.49□□□□□ -0.41
VPS13BQ7Z7G8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 KRT18P48-201ENST00000434763 852 ntBASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13BQ7Z7G8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms