Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
FOXR2Q6PJQ5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 AC092437.1-201ENST00000624794 1048 ntBASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.95■■□□□ 1.1
FOXR2Q6PJQ5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 AC005181.1-201ENST00000604782 1256 ntBASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.94■■□□□ 1.1
FOXR2Q6PJQ5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 AL355472.2-201ENST00000422958 438 ntBASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXR2Q6PJQ5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 AP001271.2-201ENST00000624018 1556 ntBASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 HLA-G-202ENST00000376815 851 ntBASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 HLA-G-203ENST00000376818 1127 ntBASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXR2Q6PJQ5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 AC004911.1-201ENST00000416316 871 ntBASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 AC093787.1-201ENST00000450396 207 ntBASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
FOXR2Q6PJQ5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms