Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H3F3CQ6NXT2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 AC133681.1-201ENST00000465482 601 ntBASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 FAM197Y4-202ENST00000622692 608 ntBASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
H3F3CQ6NXT2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 RPS2P4-201ENST00000476944 856 ntBASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
H3F3CQ6NXT2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms