Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 B3GAT3P1-201ENST00000471720 806 ntBASIC19.73■□□□□ 0.75
RIF1Q5UIP0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RIF1Q5UIP0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 AC008622.2-201ENST00000617006 1229 ntBASIC19.72■□□□□ 0.75
RIF1Q5UIP0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RIF1Q5UIP0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 AL022342.1-201ENST00000400363 863 ntBASIC19.71■□□□□ 0.75
RIF1Q5UIP0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RIF1Q5UIP0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 AC068473.5-201ENST00000616428 2072 ntBASIC19.7■□□□□ 0.74
RIF1Q5UIP0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 AC007663.1-201ENST00000438948 1240 ntBASIC19.7■□□□□ 0.74
RIF1Q5UIP0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.7■□□□□ 0.74
RIF1Q5UIP0 AC026471.6-201ENST00000622954 1905 ntBASIC19.69■□□□□ 0.74
RIF1Q5UIP0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 AL845331.1-201ENST00000424978 1190 ntBASIC19.69■□□□□ 0.74
RIF1Q5UIP0 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.69■□□□□ 0.74
RIF1Q5UIP0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 AC093323.1-202ENST00000635031 2045 ntBASIC19.69■□□□□ 0.74
RIF1Q5UIP0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
RIF1Q5UIP0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 UNC93B7-201ENST00000509439 705 ntBASIC19.68■□□□□ 0.74
RIF1Q5UIP0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RIF1Q5UIP0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms