Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPCS3P61009 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPCS3P61009 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SPCS3P61009 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.31■□□□□ 0.2
SPCS3P61009 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SPCS3P61009 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SPCS3P61009 AIRN-201ENST00000601203 4374 ntBASIC16.31■□□□□ 0.2
SPCS3P61009 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.31■□□□□ 0.2
SPCS3P61009 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.31■□□□□ 0.2
SPCS3P61009 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.31■□□□□ 0.2
SPCS3P61009 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.31■□□□□ 0.2
SPCS3P61009 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.31■□□□□ 0.2
SPCS3P61009 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS3P61009 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SPCS3P61009 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.3■□□□□ 0.2
SPCS3P61009 SMG8-203ENST00000578922 2178 ntBASIC16.3■□□□□ 0.2
SPCS3P61009 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.3■□□□□ 0.2
SPCS3P61009 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SPCS3P61009 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.3■□□□□ 0.2
SPCS3P61009 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.3■□□□□ 0.2
SPCS3P61009 AC010141.2-201ENST00000452426 721 ntBASIC16.3■□□□□ 0.2
SPCS3P61009 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.3■□□□□ 0.2
SPCS3P61009 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.3■□□□□ 0.2
SPCS3P61009 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
SPCS3P61009 LTB4R2-202ENST00000528054 3092 ntBASIC16.3■□□□□ 0.2
SPCS3P61009 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.3■□□□□ 0.2
SPCS3P61009 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SPCS3P61009 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS3P61009 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SPCS3P61009 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS3P61009 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS3P61009 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SPCS3P61009 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.29■□□□□ 0.2
SPCS3P61009 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.29■□□□□ 0.2
SPCS3P61009 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS3P61009 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.29■□□□□ 0.2
SPCS3P61009 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS3P61009 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.29■□□□□ 0.2
SPCS3P61009 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS3P61009 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS3P61009 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SPCS3P61009 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SPCS3P61009 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS3P61009 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.29■□□□□ 0.2
SPCS3P61009 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS3P61009 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SPCS3P61009 NOC2LP1-202ENST00000452600 2235 ntBASIC16.29■□□□□ 0.2
SPCS3P61009 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SPCS3P61009 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.29■□□□□ 0.2
SPCS3P61009 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SPCS3P61009 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPCS3P61009 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.28■□□□□ 0.2
SPCS3P61009 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPCS3P61009 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPCS3P61009 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.28■□□□□ 0.2
SPCS3P61009 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SPCS3P61009 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPCS3P61009 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.28■□□□□ 0.2
SPCS3P61009 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.28■□□□□ 0.2
SPCS3P61009 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.28■□□□□ 0.2
SPCS3P61009 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.28■□□□□ 0.2
SPCS3P61009 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.28■□□□□ 0.2
SPCS3P61009 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPCS3P61009 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SPCS3P61009 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.28■□□□□ 0.2
SPCS3P61009 AC020916.1-201ENST00000587762 1774 ntBASIC16.28■□□□□ 0.2
SPCS3P61009 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms