Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18■□□□□ 0.47
CLDN18P56856 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18■□□□□ 0.47
CLDN18P56856 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 DPP3P2-201ENST00000416030 1696 ntBASIC18■□□□□ 0.47
CLDN18P56856 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18■□□□□ 0.47
CLDN18P56856 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CLDN18P56856 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18■□□□□ 0.47
CLDN18P56856 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18■□□□□ 0.47
CLDN18P56856 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18■□□□□ 0.47
CLDN18P56856 AC142381.4-202ENST00000563973 229 ntBASIC18■□□□□ 0.47
CLDN18P56856 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 RN7SL471P-201ENST00000580476 299 ntBASIC18■□□□□ 0.47
CLDN18P56856 AL031963.3-201ENST00000606441 850 ntBASIC18■□□□□ 0.47
CLDN18P56856 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
CLDN18P56856 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CLDN18P56856 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18■□□□□ 0.47
CLDN18P56856 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLDN18P56856 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN18P56856 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN18P56856 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.99■□□□□ 0.47
CLDN18P56856 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN18P56856 KRT8P20-201ENST00000423953 1409 ntBASIC17.99■□□□□ 0.47
CLDN18P56856 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN18P56856 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN18P56856 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN18P56856 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.99■□□□□ 0.47
CLDN18P56856 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CLDN18P56856 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.99■□□□□ 0.47
CLDN18P56856 HLA-G-202ENST00000376815 851 ntBASIC17.99■□□□□ 0.47
CLDN18P56856 HLA-G-203ENST00000376818 1127 ntBASIC17.99■□□□□ 0.47
CLDN18P56856 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN18P56856 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN18P56856 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CLDN18P56856 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN18P56856 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN18P56856 AC066615.1-201ENST00000640911 628 ntBASIC17.99■□□□□ 0.47
CLDN18P56856 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN18P56856 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN18P56856 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN18P56856 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CLDN18P56856 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CLDN18P56856 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN18P56856 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN18P56856 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN18P56856 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 AL158047.1-201ENST00000445918 881 ntBASIC17.98■□□□□ 0.47
CLDN18P56856 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.98■□□□□ 0.47
CLDN18P56856 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
CLDN18P56856 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN18P56856 MTDHP1-201ENST00000605323 784 ntBASIC17.98■□□□□ 0.47
CLDN18P56856 AL359736.2-201ENST00000621992 437 ntBASIC17.98■□□□□ 0.47
CLDN18P56856 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.98■□□□□ 0.47
CLDN18P56856 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN18P56856 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CLDN18P56856 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN18P56856 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 KRT8P17-201ENST00000453110 1448 ntBASIC17.98■□□□□ 0.47
CLDN18P56856 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN18P56856 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN18P56856 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN18P56856 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN18P56856 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN18P56856 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN18P56856 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN18P56856 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLDN18P56856 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN18P56856 RPPH1-201ENST00000516869 333 ntBASIC17.97■□□□□ 0.47
CLDN18P56856 C1QBPP2-201ENST00000528754 825 ntBASIC17.97■□□□□ 0.47
CLDN18P56856 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN18P56856 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN18P56856 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN18P56856 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN18P56856 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN18P56856 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.97■□□□□ 0.47
CLDN18P56856 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLDN18P56856 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.97■□□□□ 0.47
CLDN18P56856 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN18P56856 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLDN18P56856 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.96■□□□□ 0.47
CLDN18P56856 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLDN18P56856 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN18P56856 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms