Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.1■□□□□ 0.97
HADHBP55084 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
HADHBP55084 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
HADHBP55084 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.1■□□□□ 0.97
HADHBP55084 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.1■□□□□ 0.97
HADHBP55084 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.1■□□□□ 0.97
HADHBP55084 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.1■□□□□ 0.97
HADHBP55084 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 KRT8P17-201ENST00000453110 1448 ntBASIC21.1■□□□□ 0.97
HADHBP55084 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HADHBP55084 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
HADHBP55084 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.09■□□□□ 0.97
HADHBP55084 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HADHBP55084 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HADHBP55084 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.09■□□□□ 0.97
HADHBP55084 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HADHBP55084 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.09■□□□□ 0.97
HADHBP55084 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.09■□□□□ 0.97
HADHBP55084 MFSD11-216ENST00000590393 1141 ntBASIC21.09■□□□□ 0.97
HADHBP55084 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
HADHBP55084 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.09■□□□□ 0.97
HADHBP55084 BX323043.1-201ENST00000641006 1765 ntBASIC21.09■□□□□ 0.97
HADHBP55084 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HADHBP55084 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.09■□□□□ 0.97
HADHBP55084 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.09■□□□□ 0.97
HADHBP55084 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HADHBP55084 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HADHBP55084 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HADHBP55084 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.08■□□□□ 0.97
HADHBP55084 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.08■□□□□ 0.97
HADHBP55084 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HADHBP55084 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
HADHBP55084 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HADHBP55084 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HADHBP55084 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
HADHBP55084 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HADHBP55084 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HADHBP55084 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.08■□□□□ 0.97
HADHBP55084 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HADHBP55084 CNN2P6-201ENST00000439038 900 ntBASIC21.08■□□□□ 0.97
HADHBP55084 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.08■□□□□ 0.97
HADHBP55084 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HADHBP55084 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.08■□□□□ 0.96
HADHBP55084 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HADHBP55084 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HADHBP55084 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HADHBP55084 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HADHBP55084 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
HADHBP55084 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HADHBP55084 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.08■□□□□ 0.96
HADHBP55084 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HADHBP55084 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HADHBP55084 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HADHBP55084 AC068338.2-201ENST00000563278 1430 ntBASIC21.07■□□□□ 0.96
HADHBP55084 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
HADHBP55084 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HADHBP55084 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.07■□□□□ 0.96
HADHBP55084 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HADHBP55084 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HADHBP55084 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HADHBP55084 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
HADHBP55084 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HADHBP55084 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HADHBP55084 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HADHBP55084 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HADHBP55084 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HADHBP55084 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HADHBP55084 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.06■□□□□ 0.96
HADHBP55084 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HADHBP55084 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HADHBP55084 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HADHBP55084 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.06■□□□□ 0.96
HADHBP55084 DUX4L16-201ENST00000555130 1264 ntBASIC21.06■□□□□ 0.96
HADHBP55084 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.06■□□□□ 0.96
HADHBP55084 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.06■□□□□ 0.96
HADHBP55084 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.06■□□□□ 0.96
HADHBP55084 AL031963.3-201ENST00000606441 850 ntBASIC21.06■□□□□ 0.96
HADHBP55084 AC105020.6-201ENST00000621523 1217 ntBASIC21.06■□□□□ 0.96
HADHBP55084 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.06■□□□□ 0.96
HADHBP55084 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
HADHBP55084 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
HADHBP55084 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HADHBP55084 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.06■□□□□ 0.96
HADHBP55084 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HADHBP55084 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HADHBP55084 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.05■□□□□ 0.96
HADHBP55084 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HADHBP55084 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.05■□□□□ 0.96
HADHBP55084 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
HADHBP55084 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HADHBP55084 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.05■□□□□ 0.96
HADHBP55084 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms