Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
NR1H2P55055 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19■□□□□ 0.63
NR1H2P55055 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19■□□□□ 0.63
NR1H2P55055 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NR1H2P55055 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19■□□□□ 0.63
NR1H2P55055 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19■□□□□ 0.63
NR1H2P55055 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19■□□□□ 0.63
NR1H2P55055 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19■□□□□ 0.63
NR1H2P55055 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
NR1H2P55055 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
NR1H2P55055 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NR1H2P55055 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
NR1H2P55055 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19■□□□□ 0.63
NR1H2P55055 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 AC005332.7-201ENST00000614046 2005 ntBASIC19■□□□□ 0.63
NR1H2P55055 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19■□□□□ 0.63
NR1H2P55055 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19■□□□□ 0.63
NR1H2P55055 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.99■□□□□ 0.63
NR1H2P55055 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.99■□□□□ 0.63
NR1H2P55055 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NR1H2P55055 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NR1H2P55055 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NR1H2P55055 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NR1H2P55055 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.99■□□□□ 0.63
NR1H2P55055 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
NR1H2P55055 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.99■□□□□ 0.63
NR1H2P55055 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NR1H2P55055 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.99■□□□□ 0.63
NR1H2P55055 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
NR1H2P55055 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NR1H2P55055 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NR1H2P55055 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NR1H2P55055 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.99■□□□□ 0.63
NR1H2P55055 AP004607.7-201ENST00000527152 1677 ntBASIC18.98■□□□□ 0.63
NR1H2P55055 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.98■□□□□ 0.63
NR1H2P55055 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 AC093503.3-201ENST00000624917 2352 ntBASIC18.98■□□□□ 0.63
NR1H2P55055 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.98■□□□□ 0.63
NR1H2P55055 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
NR1H2P55055 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.98■□□□□ 0.63
NR1H2P55055 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.98■□□□□ 0.63
NR1H2P55055 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NR1H2P55055 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
NR1H2P55055 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NR1H2P55055 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NR1H2P55055 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.97■□□□□ 0.63
NR1H2P55055 AC010141.3-201ENST00000456659 717 ntBASIC18.97■□□□□ 0.63
NR1H2P55055 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.97■□□□□ 0.63
NR1H2P55055 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.97■□□□□ 0.63
NR1H2P55055 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.97■□□□□ 0.63
NR1H2P55055 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NR1H2P55055 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.97■□□□□ 0.63
NR1H2P55055 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NR1H2P55055 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.97■□□□□ 0.63
NR1H2P55055 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms