Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDX1P52945 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.56■□□□□ 0.72
PDX1P52945 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDX1P52945 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.55■□□□□ 0.72
PDX1P52945 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PDX1P52945 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDX1P52945 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDX1P52945 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDX1P52945 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PDX1P52945 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PDX1P52945 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.55■□□□□ 0.72
PDX1P52945 AC239809.2-201ENST00000415381 517 ntBASIC19.55■□□□□ 0.72
PDX1P52945 TSPY7P-201ENST00000431358 1114 ntBASIC19.55■□□□□ 0.72
PDX1P52945 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDX1P52945 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.55■□□□□ 0.72
PDX1P52945 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDX1P52945 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDX1P52945 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.55■□□□□ 0.72
PDX1P52945 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDX1P52945 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDX1P52945 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PDX1P52945 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PDX1P52945 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.55■□□□□ 0.72
PDX1P52945 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
PDX1P52945 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDX1P52945 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDX1P52945 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.54■□□□□ 0.72
PDX1P52945 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PDX1P52945 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDX1P52945 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDX1P52945 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDX1P52945 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDX1P52945 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDX1P52945 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDX1P52945 AC211429.1-201ENST00000415277 523 ntBASIC19.54■□□□□ 0.72
PDX1P52945 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.54■□□□□ 0.72
PDX1P52945 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.54■□□□□ 0.72
PDX1P52945 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.54■□□□□ 0.72
PDX1P52945 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.54■□□□□ 0.72
PDX1P52945 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.54■□□□□ 0.72
PDX1P52945 AL356652.1-201ENST00000615962 565 ntBASIC19.54■□□□□ 0.72
PDX1P52945 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PDX1P52945 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDX1P52945 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.54■□□□□ 0.72
PDX1P52945 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PDX1P52945 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.53■□□□□ 0.72
PDX1P52945 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PDX1P52945 BX088651.1-201ENST00000540551 451 ntBASIC19.53■□□□□ 0.72
PDX1P52945 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
PDX1P52945 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PDX1P52945 REXO1L12P-201ENST00000622156 912 ntBASIC19.53■□□□□ 0.72
PDX1P52945 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.53■□□□□ 0.72
PDX1P52945 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDX1P52945 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.53■□□□□ 0.72
PDX1P52945 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDX1P52945 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDX1P52945 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.52■□□□□ 0.72
PDX1P52945 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.52■□□□□ 0.72
PDX1P52945 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDX1P52945 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.52■□□□□ 0.72
PDX1P52945 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDX1P52945 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDX1P52945 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
PDX1P52945 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.52■□□□□ 0.72
PDX1P52945 PGM5P4-201ENST00000421970 445 ntBASIC19.52■□□□□ 0.72
PDX1P52945 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDX1P52945 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDX1P52945 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDX1P52945 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.52■□□□□ 0.72
PDX1P52945 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDX1P52945 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.52■□□□□ 0.72
PDX1P52945 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.52■□□□□ 0.72
PDX1P52945 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.52■□□□□ 0.72
PDX1P52945 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.52■□□□□ 0.71
PDX1P52945 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDX1P52945 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.52■□□□□ 0.71
PDX1P52945 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDX1P52945 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.51■□□□□ 0.71
PDX1P52945 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.51■□□□□ 0.71
PDX1P52945 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.51■□□□□ 0.71
PDX1P52945 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.51■□□□□ 0.71
PDX1P52945 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDX1P52945 AL049637.2-201ENST00000641778 930 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms