Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeastyeast

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIT3P49954 tW(CCA)KtW(CCA)K 72 nt2.26□□□□□ -2.05
NIT3P49954 tW(CCA)MtW(CCA)M 72 nt2.26□□□□□ -2.05
NIT3P49954 tW(CCA)PtW(CCA)P 72 nt2.26□□□□□ -2.05
NIT3P49954 APL2YKL135C 2181 nt2.26□□□□□ -2.05
NIT3P49954 SPO21YOL091W 1830 nt2.26□□□□□ -2.05
NIT3P49954 BNI1YNL271C 5862 nt2.25□□□□□ -2.05
NIT3P49954 RLM1YPL089C 2031 nt2.25□□□□□ -2.05
NIT3P49954 PDR1YGL013C 3207 nt2.25□□□□□ -2.05
NIT3P49954 ZIP2YGL249W 2115 nt2.24□□□□□ -2.05
NIT3P49954 CSF1YLR087C 8877 nt2.24□□□□□ -2.05
NIT3P49954 YKU70YMR284W 1809 nt2.24□□□□□ -2.05
NIT3P49954 ATP7YKL016C 525 nt2.24□□□□□ -2.05
NIT3P49954 YOR218CYOR218C 420 nt2.24□□□□□ -2.05
NIT3P49954 STH1YIL126W 4080 nt2.24□□□□□ -2.05
NIT3P49954 CDC60YPL160W 3273 nt2.23□□□□□ -2.05
NIT3P49954 SIR4YDR227W 4077 nt2.23□□□□□ -2.05
NIT3P49954 SSD1YDR293C 3753 nt2.23□□□□□ -2.05
NIT3P49954 YHR032W-AYHR032W-A 180 nt2.23□□□□□ -2.05
NIT3P49954 YBR174CYBR174C 315 nt2.23□□□□□ -2.05
NIT3P49954 ARP8YOR141C 2646 nt2.23□□□□□ -2.05
NIT3P49954 MAK10YEL053C 2202 nt2.23□□□□□ -2.05
NIT3P49954 NOC3YLR002C 1992 nt2.23□□□□□ -2.05
NIT3P49954 TOR1YJR066W 7413 nt2.23□□□□□ -2.05
NIT3P49954 MAD1YGL086W 2250 nt2.22□□□□□ -2.05
NIT3P49954 SPF1YEL031W 3648 nt2.22□□□□□ -2.05
NIT3P49954 YLR140WYLR140W 327 nt2.22□□□□□ -2.05
NIT3P49954 RPS25BYLR333C 327 nt2.22□□□□□ -2.05
NIT3P49954 YOR055WYOR055W 435 nt2.22□□□□□ -2.05
NIT3P49954 YOR108C-AYOR108C-A 210 nt2.22□□□□□ -2.05
NIT3P49954 FKS3YMR306W 5358 nt2.22□□□□□ -2.05
NIT3P49954 SAS3YBL052C 2496 nt2.22□□□□□ -2.05
NIT3P49954 NEW1YPL226W 3591 nt2.21□□□□□ -2.05
NIT3P49954 PDR3YBL005W 2931 nt2.21□□□□□ -2.05
NIT3P49954 YCR087C-AYCR087C-A 462 nt2.21□□□□□ -2.06
NIT3P49954 snR70snR70 164 nt2.21□□□□□ -2.06
NIT3P49954 YEL014CYEL014C 306 nt2.21□□□□□ -2.06
NIT3P49954 PRP39YML046W 1890 nt2.21□□□□□ -2.06
NIT3P49954 RTT101YJL047C 2529 nt2.21□□□□□ -2.06
NIT3P49954 ELG1YOR144C 2376 nt2.21□□□□□ -2.06
NIT3P49954 YOR343W-BYOR343W-B 5313 nt2.21□□□□□ -2.06
NIT3P49954 YPP1YGR198W 2454 nt2.2□□□□□ -2.06
NIT3P49954 TDA9YML081W 3756 nt2.2□□□□□ -2.06
NIT3P49954 DCP2YNL118C 2913 nt2.2□□□□□ -2.06
NIT3P49954 Q0092Q0092 141 nt2.2□□□□□ -2.06
NIT3P49954 YLR342W-AYLR342W-A 174 nt2.2□□□□□ -2.06
NIT3P49954 MLH3YPL164C 2148 nt2.2□□□□□ -2.06
NIT3P49954 IST2YBR086C 2841 nt2.19□□□□□ -2.06
NIT3P49954 HIR3YJR140C 4947 nt2.19□□□□□ -2.06
NIT3P49954 RPL31AYDL075W 342 nt2.19□□□□□ -2.06
NIT3P49954 VTC1YER072W 390 nt2.19□□□□□ -2.06
NIT3P49954 YNL338WYNL338W 159 nt2.18□□□□□ -2.06
NIT3P49954 PIG1YLR273C 1947 nt2.18□□□□□ -2.06
NIT3P49954 TRS65YGR166W 1683 nt2.18□□□□□ -2.06
NIT3P49954 MCM10YIL150C 1716 nt2.17□□□□□ -2.06
NIT3P49954 YGL217CYGL217C 342 nt2.17□□□□□ -2.06
NIT3P49954 ECM12YHR021W-A 456 nt2.17□□□□□ -2.06
NIT3P49954 YBR131C-AYBR131C-A 90 nt2.17□□□□□ -2.06
NIT3P49954 snR46snR46 197 nt2.17□□□□□ -2.06
NIT3P49954 SAP185YJL098W 3177 nt2.17□□□□□ -2.06
NIT3P49954 CTR9YOL145C 3234 nt2.17□□□□□ -2.06
NIT3P49954 AGC1YPR021C 2709 nt2.17□□□□□ -2.06
NIT3P49954 YBL008W-AYBL008W-A 240 nt2.16□□□□□ -2.06
NIT3P49954 BUD2YKL092C 3315 nt2.16□□□□□ -2.06
NIT3P49954 PHO91YNR013C 2685 nt2.15□□□□□ -2.06
NIT3P49954 YFR016CYFR016C 3702 nt2.15□□□□□ -2.07
NIT3P49954 DGR2YKL121W 2559 nt2.15□□□□□ -2.07
NIT3P49954 PET309YLR067C 2898 nt2.15□□□□□ -2.07
NIT3P49954 STE11YLR362W 2154 nt2.15□□□□□ -2.07
NIT3P49954 YIR044CYIR044C 186 nt2.14□□□□□ -2.07
NIT3P49954 SVL3YPL032C 2478 nt2.14□□□□□ -2.07
NIT3P49954 YBL005W-BYBL005W-B 5268 nt2.14□□□□□ -2.07
NIT3P49954 YIL156W-BYIL156W-B 222 nt2.13□□□□□ -2.07
NIT3P49954 IRA2YOL081W 9240 nt2.13□□□□□ -2.07
NIT3P49954 HSL1YKL101W 4557 nt2.13□□□□□ -2.07
NIT3P49954 PAU3YCR104W 375 nt2.12□□□□□ -2.07
NIT3P49954 YDL007C-AYDL007C-A 258 nt2.11□□□□□ -2.07
NIT3P49954 YDL118WYDL118W 381 nt2.11□□□□□ -2.07
NIT3P49954 COF1YLL050C 432 nt2.11□□□□□ -2.07
NIT3P49954 HMI1YOL095C 2121 nt2.11□□□□□ -2.07
NIT3P49954 MGA2YIR033W 3342 nt2.1□□□□□ -2.07
NIT3P49954 YDR521WYDR521W 336 nt2.1□□□□□ -2.07
NIT3P49954 APL5YPL195W 2799 nt2.1□□□□□ -2.07
NIT3P49954 MSB1YOR188W 3414 nt2.09□□□□□ -2.07
NIT3P49954 YNL144CYNL144C 2223 nt2.09□□□□□ -2.07
NIT3P49954 YMR175W-AYMR175W-A 195 nt2.09□□□□□ -2.07
NIT3P49954 YOR072W-BYOR072W-B 162 nt2.09□□□□□ -2.07
NIT3P49954 USO1YDL058W 5373 nt2.09□□□□□ -2.07
NIT3P49954 IFH1YLR223C 3258 nt2.09□□□□□ -2.08
NIT3P49954 PDR11YIL013C 4236 nt2.09□□□□□ -2.08
NIT3P49954 YLL007CYLL007C 1998 nt2.08□□□□□ -2.08
NIT3P49954 PTP2YOR208W 2253 nt2.07□□□□□ -2.08
NIT3P49954 IRE1YHR079C 3348 nt2.07□□□□□ -2.08
NIT3P49954 ULI1YFR026C 510 nt2.07□□□□□ -2.08
NIT3P49954 RGA1YOR127W 3024 nt2.07□□□□□ -2.08
NIT3P49954 SGS1YMR190C 4344 nt2.07□□□□□ -2.08
NIT3P49954 CUL3YGR003W 2235 nt2.07□□□□□ -2.08
NIT3P49954 TBS1YBR150C 3285 nt2.07□□□□□ -2.08
NIT3P49954 VPS13YLL040C 9435 nt2.06□□□□□ -2.08
NIT3P49954 MSH6YDR097C 3729 nt2.06□□□□□ -2.08
NIT3P49954 YLR035C-AYLR035C-A 3468 nt2.06□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms