Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
KDM5CP41229 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
KDM5CP41229 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
KDM5CP41229 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC30.37■■■□□ 2.45
KDM5CP41229 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC30.37■■■□□ 2.45
KDM5CP41229 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC30.37■■■□□ 2.45
KDM5CP41229 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC30.37■■■□□ 2.45
KDM5CP41229 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
KDM5CP41229 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
KDM5CP41229 KRT8P36-201ENST00000489121 1440 ntBASIC30.37■■■□□ 2.45
KDM5CP41229 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
KDM5CP41229 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC30.37■■■□□ 2.45
KDM5CP41229 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC30.37■■■□□ 2.45
KDM5CP41229 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC30.37■■■□□ 2.45
KDM5CP41229 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
KDM5CP41229 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC30.37■■■□□ 2.45
KDM5CP41229 AC022616.7-201ENST00000525383 220 ntBASIC30.37■■■□□ 2.45
KDM5CP41229 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC30.37■■■□□ 2.45
KDM5CP41229 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC30.36■■■□□ 2.45
KDM5CP41229 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
KDM5CP41229 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC30.36■■■□□ 2.45
KDM5CP41229 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KDM5CP41229 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC30.36■■■□□ 2.45
KDM5CP41229 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
KDM5CP41229 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC30.36■■■□□ 2.45
KDM5CP41229 AP005242.2-201ENST00000580065 1175 ntBASIC30.36■■■□□ 2.45
KDM5CP41229 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC30.36■■■□□ 2.45
KDM5CP41229 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
KDM5CP41229 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC30.35■■■□□ 2.45
KDM5CP41229 USF2-205ENST00000594064 1179 ntTSL 2 BASIC30.35■■■□□ 2.45
KDM5CP41229 DGCR10-201ENST00000609839 495 ntBASIC30.35■■■□□ 2.45
KDM5CP41229 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC30.35■■■□□ 2.45
KDM5CP41229 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
KDM5CP41229 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
KDM5CP41229 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
KDM5CP41229 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
KDM5CP41229 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC30.34■■■□□ 2.45
KDM5CP41229 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
KDM5CP41229 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC30.34■■■□□ 2.45
KDM5CP41229 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
KDM5CP41229 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
KDM5CP41229 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC30.34■■■□□ 2.45
KDM5CP41229 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
KDM5CP41229 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
KDM5CP41229 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC30.33■■■□□ 2.45
KDM5CP41229 PRR31-201ENST00000371629 978 ntTSL 2 BASIC30.33■■■□□ 2.45
KDM5CP41229 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
KDM5CP41229 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC30.33■■■□□ 2.45
KDM5CP41229 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
KDM5CP41229 MIR2861-201ENST00000636310 90 ntBASIC30.33■■■□□ 2.45
KDM5CP41229 LGALS8-AS1-201ENST00000487567 1457 ntBASIC30.33■■■□□ 2.45
KDM5CP41229 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
KDM5CP41229 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
KDM5CP41229 AC087388.1-201ENST00000571370 1112 ntBASIC30.32■■■□□ 2.45
KDM5CP41229 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
KDM5CP41229 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
KDM5CP41229 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KDM5CP41229 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
KDM5CP41229 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KDM5CP41229 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
KDM5CP41229 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KDM5CP41229 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KDM5CP41229 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KDM5CP41229 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC30.32■■■□□ 2.44
KDM5CP41229 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC30.32■■■□□ 2.44
KDM5CP41229 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC30.31■■■□□ 2.44
KDM5CP41229 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
KDM5CP41229 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC30.31■■■□□ 2.44
KDM5CP41229 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
KDM5CP41229 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
KDM5CP41229 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
KDM5CP41229 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.31■■■□□ 2.44
KDM5CP41229 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC30.31■■■□□ 2.44
KDM5CP41229 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
KDM5CP41229 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC30.31■■■□□ 2.44
KDM5CP41229 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC30.31■■■□□ 2.44
KDM5CP41229 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
KDM5CP41229 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC30.31■■■□□ 2.44
KDM5CP41229 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
KDM5CP41229 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
KDM5CP41229 GOLGA2P6-201ENST00000340929 2049 ntBASIC30.31■■■□□ 2.44
KDM5CP41229 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
KDM5CP41229 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
KDM5CP41229 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC30.31■■■□□ 2.44
KDM5CP41229 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
KDM5CP41229 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
KDM5CP41229 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
KDM5CP41229 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
KDM5CP41229 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC30.3■■■□□ 2.44
KDM5CP41229 LSR-203ENST00000360798 1963 ntTSL 2 BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms